Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F13
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   7.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   7.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   7.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   7.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 414  FYSKLVCTKFYFLVFLGLIGGWSSSV-EQYS 325
            FY K+   K   +  L  IGGW+ S  ++YS
Sbjct: 1882 FYEKVTAYKSKGIKVLVAIGGWNDSAGDKYS 1912



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 414  FYSKLVCTKFYFLVFLGLIGGWSSSV-EQYS 325
            FY K+V  K   +  L  +GGW+ S   +YS
Sbjct: 2380 FYKKVVSYKSRGVKVLIALGGWNDSAGNKYS 2410


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 308 NEMVEDEYCSTDDDQPPISPKKTRK*NLVQTNFE 409
           ++++E++  S +D     SP+ T+K N V    E
Sbjct: 158 DKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVE 191


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 201 LVSVCNIVSFMLTTNCISDIMVRSLCVKQDKF 106
           +VS  NIV +M T        + +L +KQ++F
Sbjct: 42  VVSTFNIVFYMYTLILEERFKLINLIIKQEEF 73


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 308 NEMVEDEYCSTDDDQPPISPKKTRK*NLVQTNFE 409
           ++++E++  S +D     SP+ T+K N V    E
Sbjct: 106 DKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVE 139


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 308 NEMVEDEYCSTDDDQPPISPKKTRK*NLVQTNFE 409
           ++++E++  S +D     SP+ T+K N V    E
Sbjct: 289 DKLIEEDSRSNEDTSLHPSPRITKKANSVSVKVE 322


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 559  LDKCFSFKLNFNYFSSKS 506
            LD  F  K+NF YF  K+
Sbjct: 1252 LDWPFDPKVNFTYFEDKN 1269


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 559  LDKCFSFKLNFNYFSSKS 506
            LD  F  K+NF YF  K+
Sbjct: 1252 LDWPFDPKVNFTYFEDKN 1269


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 421 LFYLHHTILIVFRDKWQATRVIV 489
           L YLH  +++ F+D +    +IV
Sbjct: 241 LVYLHLAVMLGFQDIYMIVYIIV 263


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 421 LFYLHHTILIVFRDKWQATRVIV 489
           L YLH  +++ F+D +    +IV
Sbjct: 241 LVYLHLAVMLGFQDIYMIVYIIV 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,922
Number of Sequences: 336
Number of extensions: 3206
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)