Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_F12
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 54 2e-07
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 54 2e-07
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 48 7e-06
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 44 1e-04
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 38 0.007
Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.012
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 35 0.088
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 34 0.15
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 33 0.20
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 33 0.27
L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin fam... 33 0.35
U64608-5|AAB04596.1| 393|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 1.4
L17337-5|ABM74562.1| 306|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 29 4.4
Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 29 5.8
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 29 5.8
Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 7.6
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 7.6
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 7.6
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 7.6
AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-li... 28 7.6
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 96.3 bits (229), Expect = 3e-20
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 1/235 (0%)
Frame = +3
Query: 144 LEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFT-DENFYKXXXXXXXXX 320
+EGG++ VKYL+F NL+ + GL ++IVG ++ ++ DE
Sbjct: 2 VEGGVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERL--ATPILLLVI 59
Query: 321 XXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN 500
CCGA++EN+C+ ++F+V L ++ E+A I GY H + L
Sbjct: 60 GSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQ 119
Query: 501 ASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACT 680
+ +Y + V+ D +CCG+ + +DW IP +CC + + C
Sbjct: 120 TGMVRYHESRGVESAWDKTHQLFECCGVTNSSDWLTF-TTIPDSCCIEE------IEGCA 172
Query: 681 ENSTNFHSKGCLTKLVVHMKDXXXXXXXXXXXXXXXXXXXXXFACCLARSIRSQY 845
+ GC+ + + FACCL++SI +
Sbjct: 173 RENAPLFEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSILKDF 227
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 81.4 bits (192), Expect = 8e-16
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Frame = +3
Query: 162 CVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDE--NFYKXXXXXXXXXXXXXX 335
CVKY +F FN++F + G +L+ G+ A+I ++N + Y
Sbjct: 37 CVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLDPTWPLLIVGFLTF 96
Query: 336 XXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQ 515
C G+++EN + +S L ++ +AE + G+ Y L++ + LN +
Sbjct: 97 IIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVG 156
Query: 516 YPVDKNVQKTIDIIQTDLQCCGINSPADW-ADHGLPIPSTCCSAQEINDGVVAACTENST 692
Y D ++Q ID +Q CCGIN DW + I + ++ E GV +C NS+
Sbjct: 157 YRDDPDLQLLIDSMQETWMCCGINGADDWDRNTYFSIEAREVASPEAG-GVPFSCCINSS 215
Query: 693 NFHSK 707
K
Sbjct: 216 KLEFK 220
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Frame = +3
Query: 156 MSCVKYLMFCFNLLFAITGLIILIVGI----RAEINSYPYMNFTDENFYKXXXXXXXXXX 323
++ ++ + F FN F ++G+++ +GI + + ++ T ++
Sbjct: 5 VNALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAG 64
Query: 324 XXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNA 503
C GA K N C + F L++ F ELA + + K ++ V ++
Sbjct: 65 AIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYD 124
Query: 504 SI-TQYPVDKNVQKTIDIIQTDLQCCGINSPADW 602
+I +Y + + D +Q +CCG+ + DW
Sbjct: 125 TIRNRYSSETAFKDAFDTVQEKFECCGVKTYTDW 158
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Frame = +3
Query: 375 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL-NASITQYPVDKNVQKTID 551
N C ++ + + L+ + E + + H E + +L N + Y +D N+ K ++
Sbjct: 92 NRCALVFYLLMLIFSMIMEGCLIYFTFSYHATYEQELNASLPNDILNNYNLDPNIAKAVN 151
Query: 552 IIQTDLQCCGINSPADW-----ADHGLP-----------IPSTCCSAQEINDGVVAACTE 683
+Q D +CCG N+ DW DH LP IP +CC + G A ++
Sbjct: 152 YLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKTVVQRVQYIPDSCCKSTHQRKG--CALSD 209
Query: 684 NSTNFHSKGCL 716
+ N +GCL
Sbjct: 210 SPNNIFYRGCL 220
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 53.6 bits (123), Expect = 2e-07
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Frame = +3
Query: 159 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 338
+C+K+L+F N + + G+ IL +G+ I + + D
Sbjct: 28 ACLKWLVFLLNSIVFLVGVGILALGVYLFIKDFREVKLVD--IILNPAILISIFGFSICV 85
Query: 339 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASI 509
GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++
Sbjct: 86 VSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAV 145
Query: 510 TQYPVDKNVQKTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA--QEINDGVVAACT 680
Y ++N+ + +D +Q +L+CCG++S A + D + C ++ Q GV +C
Sbjct: 146 KNYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCC 205
Query: 681 ENSTNFHSKGCLTKLVVHMK 740
S + G L+ M+
Sbjct: 206 RKSVISEAAGSSNPLLPAMR 225
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 53.6 bits (123), Expect = 2e-07
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Frame = +3
Query: 159 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 338
+C+K+L+F N + + G+ IL +G+ I + + D
Sbjct: 52 ACLKWLVFLLNSIVFLVGVGILALGVYLFIKDFREVKLVD--IILNPAILISIFGFSICV 109
Query: 339 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASI 509
GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++
Sbjct: 110 VSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAV 169
Query: 510 TQYPVDKNVQKTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA--QEINDGVVAACT 680
Y ++N+ + +D +Q +L+CCG++S A + D + C ++ Q GV +C
Sbjct: 170 KNYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCC 229
Query: 681 ENSTNFHSKGCLTKLVVHMK 740
S + G L+ M+
Sbjct: 230 RKSVISEAAGSSNPLLPAMR 249
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 48.4 bits (110), Expect = 7e-06
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Frame = +3
Query: 168 KYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXX 347
KY +F N++F I G ++L +G+ +S + NF E + +
Sbjct: 58 KYGIFTANIVFLIVGGLLLAMGVWLRTDSR-FRNFISERYRQAVQEAFWEAPTLFAFSYI 116
Query: 348 XX-------------CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVM 488
CCG + +I +S+ + ++ VA L+ GI K L+ +
Sbjct: 117 IIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELS 176
Query: 489 RNLNASITQYPVDKNV-QKTIDIIQTDLQCCGINSPADWADHGLPIPSTC 635
LN + Y V Q+++D +QT +CCG +D+ IP +C
Sbjct: 177 DALNYMVQHYYQGPGVVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Frame = +3
Query: 357 CGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-------TQ 515
CGAV + +++ F +FL+ F+A++A+G + + D SV N+ + T
Sbjct: 46 CGAVNRSRFLLLAFVMFLIGTFLADVAMGTLS-LFYKDKVYSVKENVREIVKSKYGVMTS 104
Query: 516 YPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGV--VAACTE 683
P +K V + ID +Q +CCG P D+ ST ++EI + V+ CT+
Sbjct: 105 EPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWS-QSTNQDSEEIESPLFPVSCCTQ 161
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Frame = +3
Query: 390 ITFSVFLLIIF-VAELAVGIAGYMKHTDLEDSVMRNLN--ASITQYPVDKNVQKTIDIIQ 560
I F + L+++ +A + + +L S++ N+N A +T+ + + T D +Q
Sbjct: 82 IGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKLSLTWDHLQ 141
Query: 561 TDLQCCGINSPADWA-----DHGLPIPSTCCSAQEIN-DGVVAAC---TENSTNFHSKGC 713
+LQCCG+++ DW + L P +CC Q + + C + + + KGC
Sbjct: 142 RELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPDEQSLLYQKGC 201
Query: 714 LTK 722
K
Sbjct: 202 FPK 204
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 354 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKN 533
CCGA E+ ++ F ++I+ EL + + S+ + L S Y + KN
Sbjct: 86 CCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKKSSATYELRKN 145
Query: 534 VQKTIDIIQTDLQCCG 581
++ IQ QCCG
Sbjct: 146 IKP----IQNVFQCCG 157
>Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical
protein C50H2.6 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 618 PIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLV 728
P+P+T CSA I++ V +C ST H+K L+K V
Sbjct: 96 PLPATFCSAASIDNNAVKSCKNKSTTLHAKILLSKEV 132
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.088
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 402 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQC 575
V + I+FV ++ V I ++ + D + V + + Y + + T+D + T L+C
Sbjct: 99 VLVFIVFVVKI-VAIVMFLANNDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 157
Query: 576 CGINSPADWADHGLPIPSTC 635
CG N D+ G P++C
Sbjct: 158 CGANGCEDFLPAG-NFPTSC 176
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 387 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTD 566
+IT+ V ++++ E+ G+A ++ L D+ ++A T N + IIQ
Sbjct: 101 MITYLVLIIVLVSLEIGCGVAVLVRRNSLHDNTNSLIDAMYT-----TNSVNDLKIIQDK 155
Query: 567 LQCCGINS 590
CCGI +
Sbjct: 156 YNCCGIEN 163
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 402 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQC 575
V + ++FV ++ V I ++ + D + V + + Y + + T+D + T L+C
Sbjct: 88 VLVFLVFVVKI-VAIVMFLANKDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 146
Query: 576 CGINSPADWADHGLPIPSTC 635
CG N D+ G P++C
Sbjct: 147 CGANGCEDFLPAG-NFPTSC 165
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 360 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQ 539
GAV + ++ + +F++I+F+ E+A+GI +K + +V + S + N Q
Sbjct: 91 GAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSF-----NMNAQ 145
Query: 540 KTIDIIQTDLQCCGI-NSPADWADHGLPIPSTCCSA 644
I CCG N P G P TC SA
Sbjct: 146 ADISAFNFRYNCCGAENLPNLNCFAGQP---TCSSA 178
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 135 TMALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 269
TM L +K+ +F FNL+F + GLI L +G+ ++ Y N
Sbjct: 8 TMPLSCTARALKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDN 52
>L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin family
protein 2 protein.
Length = 234
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 360 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN-ASITQYPVDKNV 536
GA+ + ++ T V ++I F+ EL IA + K L + R N +T D
Sbjct: 91 GAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFANDIYLTNSVFD--- 147
Query: 537 QKTIDIIQTDLQCCGI 584
I IIQ CCG+
Sbjct: 148 ---ISIIQNTYNCCGV 160
>U64608-5|AAB04596.1| 393|Caenorhabditis elegans Hypothetical
protein T22B7.7 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1
Query: 158 HSTFESHCYSIKYYRQIVLLRNKMIHTSANKAHRATV 48
H T SH Y + YR I+ LR K+ TS NKA ATV
Sbjct: 143 HQTSLSHGYGLSPYRDII-LRGKVTWTSENKA-EATV 177
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 155 STFESHCYSIKYYRQIVLLRNKMIHTSANKAH 60
+TF S C S K ++ + NKM+H +A+ AH
Sbjct: 1941 ATFRSDCISQKISHRLYRIVNKMVHNNADIAH 1972
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Frame = +3
Query: 369 KENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN--ASITQ-YPVD--KN 533
KE C + + +V ++I V + G G L NL S+ + Y K
Sbjct: 84 KEMRCFVTSCAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDMKG 143
Query: 534 VQKTIDIIQTDLQCCGIN--------SPADWADH----GLPIPSTCCSAQEI 653
+ ++ D +Q++ +CCG+N + W H L IP +CC EI
Sbjct: 144 ITESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLIPESCCIPSEI 195
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>L17337-5|ABM74562.1| 306|Caenorhabditis elegans Hypothetical
protein ZK686.6 protein.
Length = 306
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 749 YGARRRWSRYRFGSAPRCDIRMLPRSFHSQPI 844
Y R R SR + S+P+C I LP+ F Q I
Sbjct: 7 YEKRERSSRIQKCSSPQCCINRLPKKFQDQDI 38
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 TFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRN-LNASITQYPVDKNVQKTIDIIQTDL 569
+ S++LL + + ++ + D+ M L + Y ++ +D I +
Sbjct: 102 SISIYLLCVSFMVCVLSYTLSLRISSEYDTKMTTILMTNYLNYNESMESRRLVDRIHIEY 161
Query: 570 QCCGINSPADWAD 608
CCG+NS D+ D
Sbjct: 162 SCCGVNSIEDFVD 174
>Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 366 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 542
++ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ+
Sbjct: 1 MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58
Query: 543 T 545
+
Sbjct: 59 S 59
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 366 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 542
++ +HC+I +FS LIIFVA + ++++ L D R + A+ Q V+ NVQ+
Sbjct: 1 MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58
Query: 543 T 545
+
Sbjct: 59 S 59
>Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical
protein K09B11.1 protein.
Length = 485
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 644 GGAARARYGQTVIGPVGRTVYTAAL*VCLYDINGLLDVLVYRILSNGSVQ 495
G R R T + + R + L + Y + G LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 629
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-like
kinase 1 protein.
Length = 485
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 644 GGAARARYGQTVIGPVGRTVYTAAL*VCLYDINGLLDVLVYRILSNGSVQ 495
G R R T + + R + L + Y + G LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,438,396
Number of Sequences: 27780
Number of extensions: 412546
Number of successful extensions: 1335
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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