Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F11
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.    26   7.0  
AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens ...    26   7.0  

>BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.
          Length = 1081

 Score = 26.2 bits (55), Expect(2) = 7.0
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 626 PPPXXAXXQXKXXXSXXPPPPPP 694
           PPP       K      PPPPPP
Sbjct: 316 PPPPSEKKPEKVTPPPPPPPPPP 338



 Score = 23.0 bits (47), Expect(2) = 7.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 677 PPPPPPQ 697
           PPPPPPQ
Sbjct: 338 PPPPPPQ 344


>AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33811 fis, clone CTONG2002095. ).
          Length = 1077

 Score = 26.2 bits (55), Expect(2) = 7.0
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 626 PPPXXAXXQXKXXXSXXPPPPPP 694
           PPP       K      PPPPPP
Sbjct: 316 PPPPSEKKPEKVTPPPPPPPPPP 338



 Score = 23.0 bits (47), Expect(2) = 7.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 677 PPPPPPQ 697
           PPPPPPQ
Sbjct: 338 PPPPPPQ 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.150    0.498 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,848,631
Number of Sequences: 237096
Number of extensions: 1956738
Number of successful extensions: 15083
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12014
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)