Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F08
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    30   0.033
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   3.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   5.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   6.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.7  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 290 KVSSGLADTAVSAAIVHFTTASPLPVPSTARYSIPHHQNTKTTNIF 153
           +V+  L   A+SAA V F  A P P+      S  H++N  T N+F
Sbjct: 679 EVALSLGSEALSAATVRFIEAEPQPIGKA--LSKCHNRNVTTCNMF 722


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = +2

Query: 587 CAYAPSGTLIAAGGLDNKITVFPIGGDEEPGVRKXTVATHTSYISACLXXTRTGNC 754
           C  +PS +L+ A    NK+ VF + G          + ++   + A L  +  G C
Sbjct: 59  CDMSPSLSLLCADTRLNKLAVFIVAGAVGVFSSPTILISYIYILMAILRMSADGGC 114


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 642 ILLSKPPAAINVPDGA*AQAITHV 571
           + +  PP+A NVP    +QAI  +
Sbjct: 762 VSIPPPPSAQNVPQNTNSQAIPRI 785


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 641 SCCPNPQLQSTSRMGHRHKPL 579
           SCCP P    T  +  R +P+
Sbjct: 194 SCCPEPYPDITYEIRLRRRPM 214


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 335 RAFA*VLRLLVXRDSKVSSGLADTAVSAAIVHFTTASPLPVP 210
           R +   L + V    +++  L   A+S AI+H      LPVP
Sbjct: 104 RTYEDFLSVAVYCRDRLNPNLFIYALSVAILHRPDTKDLPVP 145


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 305 REVEALKQKLEEERQK 352
           R VEA  + +EEERQ+
Sbjct: 408 RRVEAALEAVEEERQR 423


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 592 LCPIRDVDCSWG 627
           +C ++ + CSWG
Sbjct: 541 VCGVKGIPCSWG 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,606
Number of Sequences: 438
Number of extensions: 4892
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)