Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F04
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    56   4e-10
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.57 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   7.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +3

Query: 483 DNEIGENG-ETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIE 659
           D + G+ G E KK   Y+PPE  N E ++F+S I++G+NF K D I VKV+G + P PI 
Sbjct: 100 DGDRGDGGGEEKKREFYIPPEVENVE-DLFTSGITTGVNFMKLDEIEVKVTGNDAPPPIT 158

Query: 660 S 662
           S
Sbjct: 159 S 159



 Score = 55.6 bits (128), Expect = 5e-10
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = +2

Query: 662 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPNHNXXAXILMGCAXTGSG*TGXF 823
           FET+ LR ++L+NV K+GY KPT IQK AIP        LM CA TGSG T  F
Sbjct: 160 FETSGLRPHLLENVKKSGYTKPTAIQKYAIP-VILSGRDLMSCAQTGSGKTAAF 212


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 162 PPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEK 257
           P P +  H+        +RG GFP  + D+++
Sbjct: 332 PRPNIDRHEVTRPAAPANRGNGFPKRSSDEQQ 363


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 474 DYEDNEIGENGETKKP 521
           D ++N+ G NGE KKP
Sbjct: 462 DSKNNQDGNNGEKKKP 477


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 474 DYEDNEIGENGETKKP 521
           D ++N+ G NGE KKP
Sbjct: 354 DSKNNQDGNNGEKKKP 369


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 477 YEDNEIGENGETKKPVTYVPPEP-TNDETEIFSSTISSGI 593
           Y+DN   +NG  K PV ++  E  T+     +S   S G+
Sbjct: 643 YQDNVYCKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGV 682


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 653 YRKFETANLRKYVLDNVLKAG 715
           +R+FE   LR + +DN L  G
Sbjct: 288 HRRFEITALRLFTIDNKLLFG 308


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 728 TPIQKNAIPNHN 763
           TP+Q NAIP  N
Sbjct: 8   TPVQPNAIPTTN 19


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 231 PSFNEDDEKENGYG 272
           PS N+D    NGYG
Sbjct: 365 PSINDDGTCGNGYG 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,866
Number of Sequences: 336
Number of extensions: 2951
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)