Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_F03
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 156 KKCFICEICDAIALFVTIISCNKQVN 233
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 510 FYGSWPFAGLLLTCSFLRYPPDSVDNR 430
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 179 NFTNKAFFSLH 147
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 179 NFTNKAFFSLH 147
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 662 DPCRLPDTCPPFSLREA 712
           DPC   DT PP+   E+
Sbjct: 433 DPCFFHDTIPPYLFFES 449


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 662 DPCRLPDTCPPFSLREA 712
           DPC   DT PP+   E+
Sbjct: 433 DPCFFHDTIPPYLFFES 449


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 662 DPCRLPDTCPPFSLREA 712
           DPC   DT PP+   E+
Sbjct: 433 DPCFFHDTIPPYLFFES 449


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 662 DPCRLPDTCPPFSLREA 712
           DPC   DT PP+   E+
Sbjct: 433 DPCFFHDTIPPYLFFES 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,511
Number of Sequences: 336
Number of extensions: 4124
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)