Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E22
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 291 1e-79
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 161 1e-40
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 140 2e-34
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 109 7e-25
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 81 2e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 77 4e-15
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 72 9e-14
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 43 5e-05
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 41 2e-04
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.22
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.5
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 3.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.7
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.2
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 26 8.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 8.2
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 26 8.2
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 291 bits (713), Expect = 1e-79
Identities = 152/218 (69%), Positives = 157/218 (72%), Gaps = 1/218 (0%)
Frame = +1
Query: 214 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 393
MCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI
Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 75
Query: 394 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 573
V NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVA
Sbjct: 76 VNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVA 135
Query: 574 IQAVLSLYASGRTTGYRAGLRRRCLPHRAHLRGIRTPPRHPASGLS-RSRPHRLPHEDPH 750
IQAVLSLYASGRTTG G P L+ R L
Sbjct: 136 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILME 195
Query: 751 RARLLVHYHRRAGNRRDIKEKLCYVALDFEQEMAXLXQ 864
R R R DIKEKLCYVALDFEQE+ Q
Sbjct: 196 RGYTFSTTAEREIVR-DIKEKLCYVALDFEQELQTAAQ 232
Score = 120 bits (288), Expect = 4e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +2
Query: 617 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 796
GIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIV
Sbjct: 150 GIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIV 209
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 161 bits (391), Expect = 1e-40
Identities = 92/225 (40%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Frame = +1
Query: 220 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 399
KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+
Sbjct: 22 KAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQ 81
Query: 400 NWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 576
NW DME+IW + + + +L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++
Sbjct: 82 NWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSL 141
Query: 577 QAVLSLYASGRTTGYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRA 756
Q VL+LYAS RTT G+ C H I P S + + D +
Sbjct: 142 QPVLALYASARTT----GIVLECGDGLTHSVPIYDGFSIP-SAIQQEEIGGRDVTDYLQL 196
Query: 757 RLLVHYHRRAGNR-----RDIKEKLCYVALDFEQEMAXLXQQLPR 876
+L H + R+IKEK CYVA DF E+ + P+
Sbjct: 197 QLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQ 241
Score = 74.5 bits (175), Expect = 2e-14
Identities = 31/67 (46%), Positives = 49/67 (73%)
Frame = +2
Query: 617 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 796
GIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIV
Sbjct: 155 GIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIV 214
Query: 797 VTSRRSC 817
+ C
Sbjct: 215 REIKEKC 221
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 140 bits (339), Expect = 2e-34
Identities = 66/135 (48%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Frame = +1
Query: 220 KAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI 393
K G+A D+ PR FPSIVGRP R + + KD VGDEA++ R +L +KYP+E+GI
Sbjct: 16 KVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGI 75
Query: 394 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 573
+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM + MFE + +YVA
Sbjct: 76 IRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVA 135
Query: 574 IQAVLSLYASGRTTG 618
IQAVLSLYA G ++G
Sbjct: 136 IQAVLSLYAQGLSSG 150
Score = 76.6 bits (180), Expect = 4e-15
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +2
Query: 617 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 796
G+V+DSGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E V
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETV 209
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 109 bits (261), Expect = 7e-25
Identities = 62/152 (40%), Positives = 83/152 (54%), Gaps = 24/152 (15%)
Frame = +1
Query: 220 KAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK--------------DSYV 330
K G+AG+DAP VFP+++ R G G M K D ++
Sbjct: 18 KLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFI 76
Query: 331 GDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 507
G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE PLNP
Sbjct: 77 GNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPP 136
Query: 508 ANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 603
NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 137 ENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Score = 56.0 bits (129), Expect = 7e-09
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +2
Query: 617 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 787
G V+DSGDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER
Sbjct: 181 GTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 81.4 bits (192), Expect = 2e-16
Identities = 46/132 (34%), Positives = 69/132 (52%)
Frame = +1
Query: 220 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 399
+ GF+G+D P+ V PS G + G + Y+ +S G + +K I +G V
Sbjct: 24 RIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVE 75
Query: 400 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 579
NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q
Sbjct: 76 NWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQ 135
Query: 580 AVLSLYASGRTT 615
+ +ASG+ T
Sbjct: 136 ETCAAFASGKGT 147
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 76.6 bits (180), Expect = 4e-15
Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +1
Query: 220 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-KYPIEHGIV 396
+AG+ G+ P+ VF ++V R R + + + + VG++ + G ++ + P E ++
Sbjct: 37 RAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVI 92
Query: 397 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 576
+NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N P++ I
Sbjct: 93 SNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGI 151
Query: 577 QAVLSLY 597
+ S Y
Sbjct: 152 DGLFSFY 158
Score = 34.7 bits (76), Expect = 0.018
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 617 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 769
GIVL+ G+ SH +P+ G + R+ G + YL+K+ + SF
Sbjct: 167 GIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 72.1 bits (169), Expect = 9e-14
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Frame = +1
Query: 208 PXMC--KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKY 375
P C + G+AG+++P + PS + GV + ++ YV DE Q I + +K
Sbjct: 17 PGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKN 70
Query: 376 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 555
+GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE +
Sbjct: 71 GKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHV 130
Query: 556 PAMYVAIQAVLSLYASGRTT 615
PA Y+ QAV +A+ ++T
Sbjct: 131 PAFYLTKQAVCVAFANSKST 150
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 376 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 543
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 544 TFNTPAMYVAIQAVLSLYASG 606
P +A + ++ LYA G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG 192
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +2
Query: 620 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 766
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 799 DIKEKLCYVALDFEQEMAXLXQQLPR 876
+IKE +CYV+ +F+++M + + PR
Sbjct: 217 EIKESVCYVSQNFKEDM-EICHEKPR 241
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 436 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 579
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 235 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 378
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 343 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 254
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 623 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 769
V+D G + + EG +P++ ++++ G D+T MK+L + +
Sbjct: 295 VVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 335 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 219
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 478 LLTEAPLNPKANREKMTQIMFETFN 552
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 541 ETFNTPAMYVAIQAVLSLYASGRTTGYRAGLRRRCLPHRAHLRGIRTPPRHPASGLS--- 711
+ N A+ + I L S R T A + + +R +R P ASG++
Sbjct: 29 KVINLNALKMRISKKHQLSESPRLTDIIAAIPPDAYLKESLMRKLRAKPVRTASGIAVVA 88
Query: 712 -RSRPHRLPH 738
+PHR PH
Sbjct: 89 VMCKPHRCPH 98
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 372 FEGQDTSFALCLISYIRVLLSHTDHHA 292
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 75 RPKLTSWNQNLKEFP 31
RP TSW +N +EFP
Sbjct: 129 RPHWTSWTENSEEFP 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,543,987
Number of Sequences: 5004
Number of extensions: 77763
Number of successful extensions: 243
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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