Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E21
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   1.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 399  NKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSIDSL--EANVSGSHIVNINDLEI 572
            N+ EE    I    N   + K+K      N+NE    +D    E ++  S + N+ ++++
Sbjct: 1488 NRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDV 1547

Query: 573  EN 578
             +
Sbjct: 1548 NS 1549


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 580 PFSISRSFMFTMCDPLTLASNESIDPDSSFVFPFKLS 470
           P  I R F  +    ++ AS E + PD+  V PF  S
Sbjct: 224 PTFIGRGFAASSVIDVSFASREIVRPDTWSVIPFSRS 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,665
Number of Sequences: 2352
Number of extensions: 18097
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)