Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E21
         (917 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P...    34   0.31 
AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like...    31   2.9  
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA...    31   2.9  
AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective tr...    30   5.1  
AE014296-3194|AAF49126.2|  717|Drosophila melanogaster CG8780-PA...    30   5.1  
AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-P...    30   5.1  

>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
            protein.
          Length = 1943

 Score = 33.9 bits (74), Expect = 0.31
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +3

Query: 297  SNADFTNNDFNIINEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDDKQKADN 476
            +N    +ND  +   +  QIT T+  P + +P    T  N   +   T      ++KA+N
Sbjct: 1676 ANQTTASNDVQVTINSQSQITSTKKEPEEDVPRRQVTVNNHINVLGDTMPQA-SQEKAEN 1734

Query: 477  LNGNTNEES-GSIDSLEANVSGSHIVNINDLEIEN 578
             NG   E   G+++++    S +  + ++  E +N
Sbjct: 1735 FNGRPEENGYGAVETVPTYESQAMNIRLDATENKN 1769


>AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like
            kinetochore motorprotein CENP-meta protein.
          Length = 2244

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +3

Query: 333  INEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSI 512
            INE   Q+T  E   L+K   +NK E+    IE +   N +     + L      ES   
Sbjct: 1038 INEMREQMTNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMS 1097

Query: 513  DSL 521
            +SL
Sbjct: 1098 ESL 1100


>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
            protein.
          Length = 2013

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +3

Query: 333  INEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSI 512
            INE   Q+T  E   L+K   +NK E+    IE +   N +     + L      ES   
Sbjct: 1038 INEMREQMTNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMS 1097

Query: 513  DSL 521
            +SL
Sbjct: 1098 ESL 1100


>AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective
           transmitter-recyclingprotein protein.
          Length = 1483

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 37/124 (29%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
 Frame = +3

Query: 264 GCHTLLTATKGSNADFTNNDFNIINEATRQIT--LTELPPLQKI------------PAMN 401
           G  T+L  T+ SN    NND NI  E   + +  + E  P+ KI             AMN
Sbjct: 344 GRPTVLYETEVSNVKSANNDINIFEEGVGKASQIIIEDKPVTKIKLINEPSCMNDKSAMN 403

Query: 402 KTEENPFL-----IEDVTNSNVDDKQKADNL---NGNTNEESGSIDSLEANVSGSHIVNI 557
            T   P +      ED    NVDD     NL   N + N E G    L+ +   +     
Sbjct: 404 CTSMGPVVKENDFDEDAEIKNVDDMVPCQNLIKSNEDINSEFGFSSKLKQDFDQTCTALR 463

Query: 558 NDLE 569
           ND E
Sbjct: 464 NDAE 467


>AE014296-3194|AAF49126.2|  717|Drosophila melanogaster CG8780-PA
           protein.
          Length = 717

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 390 PAMNKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSIDSLEANVS 536
           P ++ TE  P  I    N+N ++     N N N N  +   +S+E ++S
Sbjct: 652 PQVSSTEPGPMDISHNNNNNNNNNNNNSNSNNNNNPSTKYAESMENSLS 700


>AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-PA
           protein.
          Length = 1483

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 37/124 (29%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
 Frame = +3

Query: 264 GCHTLLTATKGSNADFTNNDFNIINEATRQIT--LTELPPLQKI------------PAMN 401
           G  T+L  T+ SN    NND NI  E   + +  + E  P+ KI             AMN
Sbjct: 344 GRPTVLYETEVSNVKSANNDINIFEEGVGKASQIIIEDKPVTKIKLINEPSCMNDKSAMN 403

Query: 402 KTEENPFL-----IEDVTNSNVDDKQKADNL---NGNTNEESGSIDSLEANVSGSHIVNI 557
            T   P +      ED    NVDD     NL   N + N E G    L+ +   +     
Sbjct: 404 CTSMGPVVKENDFDEDAEIKNVDDMVPCQNLIKSNEDINSEFGFSSKLKQDFDQTCTALR 463

Query: 558 NDLE 569
           ND E
Sbjct: 464 NDAE 467


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,024,270
Number of Sequences: 53049
Number of extensions: 725518
Number of successful extensions: 2584
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2563
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)