Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E21
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical pr...    32   0.50 
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U64598-5|AAK39217.3|  638|Caenorhabditis elegans Mechanosensory ...    30   2.0  
Z49909-8|CAA90111.1|  204|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AL024499-5|CAC42318.1|  562|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF031840-1|AAC13676.1|  562|Caenorhabditis elegans GLY6c protein.      29   3.5  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical...    29   6.2  
Z31590-5|CAA83462.1|  245|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AL032663-2|CAA21759.1|   94|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical
           protein C51E3.6 protein.
          Length = 555

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = -2

Query: 292 LVAVSRVWQPPHATLSTMCPFMAVTRLRGVLIGDHLV*VGVVDIVQTQFIMPRLA 128
           +V VS +   P     +MCP  ++  LR  LI    V  G+  I+QT F M RLA
Sbjct: 41  MVCVSALLTVPLIMADSMCPGSSIAVLRQTLISSTFVSSGISTIIQTLFGM-RLA 94


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical protein
            C27B7.7 protein.
          Length = 1471

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +3

Query: 276  LLTATKGSNADFTNNDFNIINEATRQITLTELP-PLQKIPAMNKTEENPFLIEDVTNSNV 452
            L+T+     A     + N+  E +   T    P P+     MNK+ EN     ++ N  +
Sbjct: 866  LMTSVTLEGAPLIEKEPNLFEELSVTCTGMGSPAPIITWEWMNKSIENGTEGWNILNIQI 925

Query: 453  DDKQKADNLNGNTNEESGSIDSLEANVSGSHIVNI 557
            DD      +  N   ESG +  L  N  GS   ++
Sbjct: 926  DDTTVVSKITRNNIRESGDLTCLANNNEGSSSASV 960


>U64598-5|AAK39217.3|  638|Caenorhabditis elegans Mechanosensory
           abnormality protein18 protein.
          Length = 638

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = +3

Query: 312 TNNDFNIINEATRQITLTELPPLQKIPAMNKTEENPFLIEDVTN--SNVDD-KQKADNLN 482
           T    N+ +   R I + + PPL K  ++ K    P L ED+ +  S V +   ++  LN
Sbjct: 156 TAERINVDSARKRSIDVKQKPPLVKEMSLAKINLTPVLPEDIADLTSPVSEVSGQSKELN 215

Query: 483 GNTNEESGSIDSLEANVSGSHIVNINDLEI 572
           G+   ES  +DS E       +   N L I
Sbjct: 216 GDV--ESSVVDSEEVQTPIQQVSGQNPLLI 243


>Z49909-8|CAA90111.1|  204|Caenorhabditis elegans Hypothetical
           protein C14A4.7a protein.
          Length = 204

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 475 LSAFCLSSTLEFVTSSIKNGFSSVLFIAGIFCKGGNSVRVICLVASLIMLK 323
           +S F   S + F+TS   +G   VL++   FC     VR+ C+  SL  L+
Sbjct: 133 VSFFIFMSGILFITSESYSG-DGVLYVGAFFCFLIFGVRIACIFKSLPQLR 182


>AL024499-5|CAC42318.1|  562|Caenorhabditis elegans Hypothetical
           protein H38K22.5c protein.
          Length = 562

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 126 AASRGIINCVWTISTTPTQTRWSPIN--TPLKRVTAMNGH-IVDNVACGGCHTLLTATK 293
           ++S   +   WT+ + PTQT   P    T + ++T  + H ++ +  CG C + L   +
Sbjct: 480 SSSNSSVCLAWTLRSCPTQTTAQPSGQVTRVPKITDCSDHPVLWDSTCGSCGSTLATVE 538


>AF031840-1|AAC13676.1|  562|Caenorhabditis elegans GLY6c protein.
          Length = 562

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 126 AASRGIINCVWTISTTPTQTRWSPIN--TPLKRVTAMNGH-IVDNVACGGCHTLLTATK 293
           ++S   +   WT+ + PTQT   P    T + ++T  + H ++ +  CG C + L   +
Sbjct: 480 SSSNSSVCLAWTLRSCPTQTTAQPSGQVTRVPKITDCSDHPVLWDSTCGSCGSTLATVE 538


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = +3

Query: 351 QITLTELPPLQKIPAMNKTEENPFLIEDVTNSNVDDKQKADNLNGNTNEESGSIDSLEAN 530
           +I L E+P L     + +T ENP + E  T    D  +  +NL  N +E+S  ++ LE N
Sbjct: 283 EIDLPEVPSLD----LEETTENPEIPEISTPREEDSAENLENLVEN-SEKSEILEDLEEN 337

Query: 531 VSGSHIVNINDLEIENGSTHDLAD 602
                  N+ +   + G   DLA+
Sbjct: 338 SK-----NLTENSEKPGILEDLAE 356


>Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 447 NVDDKQKADNLNGNTNEESGSIDSLEANVSGSHIVNINDLEIENGSTHDL 596
           N +D ++ADN + +   +  +++ L   + G ++ +++D   ENG  H+L
Sbjct: 225 NEEDSEEADNYDPDDAYDELNLEKLCQQIGGVNVASVDDEHRENG--HEL 272


>AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = +3

Query: 447 NVDDKQKADNLNGNTNEESGSIDSLEANVSGSHIVNINDLEIENGSTHDL 596
           N +D ++ADN + +   +  +++ L   + G ++ +++D   ENG  H+L
Sbjct: 225 NEEDSEEADNYDPDDAYDELNLEKLCQQIGGVNVASVDDEHRENG--HEL 272


>Z31590-5|CAA83462.1|  245|Caenorhabditis elegans Hypothetical
           protein R01H10.4 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -2

Query: 385 FCKGGNSVRVICLVASLIMLKSL--FVKSAFEPLVAVSRVWQPPHAT 251
           +  GGNS+ V+  +  L   K        AF+    + RVW P H T
Sbjct: 115 YVAGGNSIGVVDRICDLPTEKQACAMTPQAFDEDTGLCRVWPPRHTT 161


>AL032663-2|CAA21759.1|   94|Caenorhabditis elegans Hypothetical
           protein Y75B12B.3 protein.
          Length = 94

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 429 EDVTNSNVDDKQKADNLNGNTNEESGSIDSLEANV 533
           + V N  V D+QK++NL     E  G +D+L+  +
Sbjct: 36  QQVNNPEVSDEQKSENLE-KLKESRGDLDNLQKKI 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,822,803
Number of Sequences: 27780
Number of extensions: 362696
Number of successful extensions: 1153
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)