Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E19
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 37 0.019
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 37 0.019
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 37 0.024
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 37 0.024
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 37 0.024
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 36 0.032
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 34 0.17
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 33 0.30
11_06_0262 + 21771577-21772059,21772167-21773252 32 0.70
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 32 0.70
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 32 0.70
10_01_0055 - 785172-785997,786859-787394,787478-787695,787789-78... 30 2.8
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 30 2.8
10_08_1057 + 22594419-22594466,22594710-22594776,22595053-225952... 29 3.7
10_01_0061 + 815761-816117,817298-818002 29 3.7
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 4.9
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 29 4.9
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978... 29 6.5
04_04_0593 - 26480036-26481438,26481915-26482083 29 6.5
01_06_1703 + 39301075-39301829,39302735-39303560 28 8.6
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 595 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 696
I S +A+ GRK +L++ AIP IIGW+ + AK
Sbjct: 117 IASGQIAEYIGRKGSLMIAAIPNIIGWLAISFAK 150
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 595 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 696
I S +A+ GRK +L++ AIP IIGW+ + AK
Sbjct: 117 IASGQMAEYIGRKGSLMIAAIPNIIGWLAISFAK 150
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 595 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 696
I S +A+ GRK +L++ A+P IIGW+ + AK
Sbjct: 118 IASGQMAEYIGRKGSLIIAAVPNIIGWLAISFAK 151
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 562 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA 693
S++ + + + + S LAD GRKTT+ L AI I+GW + A
Sbjct: 1032 SVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTIYFA 1075
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 36.7 bits (81), Expect = 0.024
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 553 WIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA 693
W+VS + + LADKFGR T +L AIP +G L A
Sbjct: 94 WVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGAFLSATA 140
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 36.3 bits (80), Expect = 0.032
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 514 KKVQYQQLPTKGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA 693
+++ +Q P +VSI I+ + + S+ L D FG K TL + +IP I+G +L A
Sbjct: 132 RELGFQGNPFLQGLVVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGALLSAQA 191
Query: 694 KS 699
S
Sbjct: 192 DS 193
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 559 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKS 699
VSI I S TP+ A+LAD + GR T ++ IIG ++V V+ S
Sbjct: 89 VSIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLIVTVSSS 136
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 562 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL-VIVAKSCQCCTSRGFLRPG 738
S + L + + I ++ ++ FGRK TL + A+ ++IG IL I T R L G
Sbjct: 88 SSLFLSAMVAGIFASPMSRAFGRKWTLFVAAVAYLIGAILGAISFNFIVLLTGRLLLGVG 147
Query: 739 LWSCVH 756
+ C+H
Sbjct: 148 VGVCIH 153
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 31.9 bits (69), Expect = 0.70
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 565 IMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 684
I+++ S+ + + S +L D+FGR+ LL G ++ L+
Sbjct: 339 ILVVVSSASTLASMFLVDRFGRRALLLAGGAQMLVSEALI 378
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/82 (25%), Positives = 42/82 (51%)
Frame = +1
Query: 448 SLLQQPVLATVGRLLLYCILNQKKVQYQQLPTKGSWIVSIMILCSALTPIPSAYLADKFG 627
+LLQ AT+ +LY +K+ Q P IV++ ++ + + S +AD FG
Sbjct: 15 NLLQGWDNATIAGAVLYI---KKEFNLQSEPLIEGLIVAMSLIGATIITTFSGAVADSFG 71
Query: 628 RKTTLLLGAIPFIIGWILVIVA 693
R+ L+ A+ + + ++++ A
Sbjct: 72 RRPMLIASAVLYFVSGLVMLWA 93
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 559 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKS 699
VSI I TP+ A+LAD + GR T+++ + I+G I++ V+ S
Sbjct: 68 VSIWIGSCFFTPLIGAFLADTYWGRYWTVVMSILVIILGMIVLTVSAS 115
>10_01_0055 -
785172-785997,786859-787394,787478-787695,787789-787891,
788723-788770
Length = 576
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 559 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKS 699
VS + LTP+ A+LAD + GR T+++ +I G ++V V+ S
Sbjct: 86 VSAWVGACFLTPVVGAFLADTYWGRYWTIVVFLPVYITGMLIVTVSAS 133
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 582 GSNTDSIRLSRRQIRKKNYTASRSYTLHNRLDTCYR 689
G + D++ SRR +R S TL N L CYR
Sbjct: 65 GGDADAVSTSRRALRSAKIPESEFTTLPNGLKFCYR 100
>10_08_1057 +
22594419-22594466,22594710-22594776,22595053-22595270,
22595425-22595981,22596398-22597217
Length = 569
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 586 LTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKS 699
LTP+ A+LAD + G+ T+ + + ++IG +LVI A +
Sbjct: 83 LTPVLGAFLADTYWGKYKTIAISTVFYLIG-LLVITASA 120
>10_01_0061 + 815761-816117,817298-818002
Length = 353
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +1
Query: 586 LTPIPSAYLADKF-GRKTTLLL 648
LTP+ A++AD F GR+TT+LL
Sbjct: 91 LTPLVGAFIADSFLGRRTTILL 112
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 574 LCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 684
LC+ I + + D+FGR+ L+G I I+ + V
Sbjct: 335 LCATFANIMAMIVVDRFGRRKLFLVGGIQMILSQLAV 371
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 KVQYQQLPTKGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVA 693
KVQ Q T S I + C LT I A+LAD + GR T+++ F G +L+ ++
Sbjct: 106 KVQGQSNVTAASNIAAWQGNCY-LTTILGAFLADSYWGRHRTIVVSLTTFTFGMVLLTLS 164
>04_04_1022 +
30195703-30195753,30195925-30195987,30197535-30197843,
30197934-30199292
Length = 593
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 580 SALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILV 684
S LTP+ A +AD F G T+L+ + +++G +LV
Sbjct: 111 SYLTPVFGAIIADTFWGNYNTILVSLVFYLLGMMLV 146
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 556 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKS 699
+V + + S L + +D GRK T+ LGAI F G ++ A S
Sbjct: 82 LVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAIVFQAGAAIMTFAPS 129
>01_06_1703 + 39301075-39301829,39302735-39303560
Length = 526
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGW 675
++TP+ +AYLAD F GR T+LL ++G+
Sbjct: 47 SITPLVAAYLADAFLGRYWTILLFMAISVLGY 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,597,397
Number of Sequences: 37544
Number of extensions: 345049
Number of successful extensions: 868
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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