Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E15
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0566 - 19572410-19572504,19572590-19572708,19573109-195731... 96 3e-20
04_04_1208 - 31750493-31750587,31750733-31750851,31751425-317514... 96 4e-20
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535... 66 5e-11
11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834 48 1e-05
02_04_0068 - 19442643-19442734,19442824-19442885,19443013-194430... 46 3e-05
10_08_0502 - 18369491-18369592,18369782-18369906,18370824-183708... 31 1.3
11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527 30 2.2
11_01_0522 - 4103138-4103926 29 3.9
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 5.1
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 29 6.7
>07_03_0566 -
19572410-19572504,19572590-19572708,19573109-19573161,
19573251-19573306,19574297-19574340,19576767-19576816,
19577393-19577398,19577675-19578103
Length = 283
Score = 96.3 bits (229), Expect = 3e-20
Identities = 44/105 (41%), Positives = 71/105 (67%)
Frame = +1
Query: 85 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKKFLVPEDITMSQFLVIIRNRIRVKP 264
R+ E I+ K+ +IP+IVE+ K ++P +DKKK+LVP D+T+ QF+ ++R RI++ P
Sbjct: 179 RQAESARIREKYSDRIPVIVEKADKT-DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSP 237
Query: 265 NQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLYITYASQEVFG 399
+A+++ + N + SL M+ YE DEDGFLY+TY+ + FG
Sbjct: 238 EKAIFVFVKNTLPPTASL-MSAIYEENKDEDGFLYMTYSGENTFG 281
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/66 (31%), Positives = 42/66 (63%)
Frame = +1
Query: 418 EKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPQELTMSQFLYIIRTKMKL 597
E+ E IR ++ +++P+ V + + +VP + + K+LVP +LT+ QF+Y++R ++KL
Sbjct: 177 ERRQAESARIREKYSDRIPVIVEKADKT-DVPEIDKKKYLVPADLTVGQFVYVVRKRIKL 235
Query: 598 RDSQGI 615
+ I
Sbjct: 236 SPEKAI 241
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = +2
Query: 608 RALYLLVNDKVLASHSMTMAQAYQQFRSHDGYLHITYAAQQVFG 739
+A+++ V + + + S+ M+ Y++ + DG+L++TY+ + FG
Sbjct: 239 KAIFVFVKNTLPPTASL-MSAIYEENKDEDGFLYMTYSGENTFG 281
>04_04_1208 -
31750493-31750587,31750733-31750851,31751425-31751477,
31751567-31751622,31752690-31752726
Length = 119
Score = 95.9 bits (228), Expect = 4e-20
Identities = 41/105 (39%), Positives = 71/105 (67%)
Frame = +1
Query: 85 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKKFLVPEDITMSQFLVIIRNRIRVKP 264
R+ E I+ K+ +IP+IVE+ + ++P +DKKK+LVP D+T+ QF+ ++R RI++ P
Sbjct: 15 RQAEANRIREKYSDRIPVIVEKAERS-DIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSP 73
Query: 265 NQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLYITYASQEVFG 399
+A+++ + N ++ + M+ YE DEDGFLY+TY+ + FG
Sbjct: 74 EKAIFIFVKN-TLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/72 (30%), Positives = 44/72 (61%)
Frame = +1
Query: 406 DDMQEKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTKFLVPQELTMSQFLYIIRT 585
D E+ E IR ++ +++P+ V + R ++P + + K+LVP +LT+ QF+Y++R
Sbjct: 9 DHTLERRQAEANRIREKYSDRIPVIVEKAERS-DIPDIDKKKYLVPADLTVGQFVYVVRK 67
Query: 586 KMKLRDSQGIVL 621
++KL + I +
Sbjct: 68 RIKLSPEKAIFI 79
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 608 RALYLLVNDKVLASHSMTMAQAYQQFRSHDGYLHITYAAQQVFGM 742
+A+++ V + L + M+ Y++ + DG+L++TY+ + FG+
Sbjct: 75 KAIFIFVKN-TLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGL 118
>08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,
5350375-5350589,5351123-5351393,5351986-5352161,
5352287-5352394,5352821-5352930,5354291-5354393,
5354658-5354828,5354952-5355080,5355322-5355504,
5355612-5355701,5355823-5355934,5356100-5356227,
5357769-5357825,5357872-5357923,5358318-5358393,
5358860-5358950,5359046-5359224,5359563-5359681,
5359783-5359880
Length = 1955
Score = 65.7 bits (153), Expect = 5e-11
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +1
Query: 190 KFLVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLY 369
++LVP D+T+ QF+ ++R RI++ +A+++ + N ++ + M+ YE DEDGFLY
Sbjct: 1884 RYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN-TLPPTAALMSAIYEENKDEDGFLY 1942
Query: 370 ITYASQEVFG 399
+TY+ + FG
Sbjct: 1943 MTYSGENTFG 1952
Score = 36.3 bits (80), Expect(2) = 3e-04
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +1
Query: 526 TKFLVPQELTMSQFLYIIRTKMKLRDSQGIVL 621
T++LVP +LT+ QF+Y++R ++KL + I +
Sbjct: 1883 TRYLVPADLTVGQFVYVVRKRIKLSAEKAIFI 1914
Score = 35.1 bits (77), Expect = 0.078
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 85 RKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKK 192
R+ E I+ K+P +IP+IVE+ + ++P +DKKK
Sbjct: 1808 RQAEANRIREKYPDRIPVIVEKAERS-DIPDIDKKK 1842
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +2
Query: 608 RALYLLVNDKVLASHSMTMAQAYQQFRSHDGYLHITYAAQQVFGMNV 748
+A+++ V + L + M+ Y++ + DG+L++TY+ + FG+ V
Sbjct: 1910 KAIFIFVKN-TLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 1955
Score = 25.8 bits (54), Expect(2) = 3e-04
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +1
Query: 418 EKSNREVEAIRHRFPNKVPLYVTRYVRDREVPVLGRTK 531
E+ E IR ++P+++P+ V + R ++P + + K
Sbjct: 1806 ERRQAEANRIREKYPDRIPVIVEKAERS-DIPDIDKKK 1842
>11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834
Length = 273
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 196 LVPEDITMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLTMAQAYENYGDE-DGFLYI 372
++ E + S + + ++ + P AL++ +NN + L M YE+Y DE DGFLY+
Sbjct: 206 VIVEKFSRSNLPEMEKRKLHLSPGTALFVFVNNTLPQTAQL-MGSVYESYKDEGDGFLYL 264
Query: 373 TYASQEVFG 399
Y+S++ FG
Sbjct: 265 CYSSEKTFG 273
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 611 ALYLLVNDKVLASHSMTMAQAYQQFRSH-DGYLHITYAAQQVFG 739
AL++ VN+ L + M Y+ ++ DG+L++ Y++++ FG
Sbjct: 231 ALFVFVNN-TLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 273
>02_04_0068 -
19442643-19442734,19442824-19442885,19443013-19443067,
19443290-19443344
Length = 87
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 RNRIRVKPNQALYLIINNRSMLSMSLTMAQAYENYGDE-DGFLYITYASQEVFG 399
+ ++ + P AL++ +NN + L M YE+Y DE DGFLY+ Y+S++ FG
Sbjct: 35 KRKLHLPPGTALFVFVNNTLPQTAQL-MGSVYESYKDEGDGFLYLCYSSEKTFG 87
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 611 ALYLLVNDKVLASHSMTMAQAYQQFRSH-DGYLHITYAAQQVFG 739
AL++ VN+ L + M Y+ ++ DG+L++ Y++++ FG
Sbjct: 45 ALFVFVNN-TLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 87
>10_08_0502 -
18369491-18369592,18369782-18369906,18370824-18370875,
18372166-18372747
Length = 286
Score = 31.1 bits (67), Expect = 1.3
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Frame = +1
Query: 61 PNGSEIIIRKEEVMAIKSKFPTKIPLIVERYHKERNLPTLDKKKFLVPEDITMSQFLVII 240
P+G++ ++++EE KSK P + E+ K++ L T+ L+ T +
Sbjct: 73 PDGTQAVLKEEEESNSKSKAPAE----GEKKRKKKKLVTVKLSDELMGYLRTKEVMAYLA 128
Query: 241 RNRIR---VKPNQALYLIINNRSMLSMSLTMAQAYENYGDEDGFLYITYASQEVFGYQDD 411
R R + P A ++ ++ ++ AQ +EN + D F+ Y ++ GY +
Sbjct: 129 RETPRPLPIDPGVAQHMFVDQELRQEIA---AQVHEN-REFDAFVLYQYRTK---GYAEI 181
Query: 412 MQEKSNREVEAIRHRFPNKVPLY 480
QE ++ + + + N +P Y
Sbjct: 182 QQEVTDDDDDDDETKTTNGLPAY 204
>11_04_0235 - 15209003-15211187,15212242-15212319,15212743-15213527
Length = 1015
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 517 LGRTKFLVPQELTMSQFLYII---RTKMKLRDSQGIVLACERQSFGEPQYDD 663
LG T ++P+E+T +FL + RTK+K+ Q I L C FG + D
Sbjct: 615 LGGTVTMLPKEITKLKFLETLDVRRTKIKVLPIQVIKLPCLTHLFGNFKLQD 666
>11_01_0522 - 4103138-4103926
Length = 262
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = -2
Query: 683 TAGTPAPSSYCGSPKL-----CRSQASTMPCESR 597
T+ +PS Y SP+L CRS AS PC SR
Sbjct: 99 TSPRASPSPYYHSPRLSSAAACRSAASASPCRSR 132
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 214 TMSQFLVIIRNRIRVKPNQALYLIINNRSMLSMSLT--MAQAYENYGDEDGFLYITYASQ 387
++S ++ I VK + LY + R L +S+T +AQ+YE E Q
Sbjct: 354 SVSMICAMLLEFIEVKGSFQLYYY-HGRDFLVLSMTAQLAQSYEGLKQEHDKKIGLLRKQ 412
Query: 388 EVFGYQDDMQEKSNREVEAI 447
EV G EK+ E+E++
Sbjct: 413 EVKGVDYLKMEKNKMEIESL 432
>01_06_1127 - 34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +1
Query: 319 TMAQAYENYGDEDGFLYITYASQEVFGYQDDMQEKSNREVEAIRHRFPNKVPLYVTRYVR 498
T+A AY+N GD D + Y+ S DD + RE++ R P + R VR
Sbjct: 1332 TLATAYKNLGD-DVWRYVGKLSDAQRSMLDDRFKWKAREMDKRREGRPGDARAALRRSVR 1390
Query: 499 DREVPVLGRTKFLVPQELTMSQFLY 573
+ + ++ V + + F Y
Sbjct: 1391 ENGSDIAEQSGEAVSRSMAGENFGY 1415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,860,415
Number of Sequences: 37544
Number of extensions: 462762
Number of successful extensions: 1186
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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