Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E12
         (928 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.050
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.35 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.7  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 0.050
 Identities = 32/137 (23%), Positives = 35/137 (25%), Gaps = 4/137 (2%)
 Frame = +3

Query: 453 RPXXRXPPAPGRXXPAXXVIXSPGGXXGPPGXXXTXGXTMXXKXXKSPXTAKXPXGAXXS 632
           RP    PP P    P   V     G    P      G          P   + P GA   
Sbjct: 180 RPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPG 239

Query: 633 RGPA----PLXAMXNXAXXXXGXXNPPXIPGGXTXXXXXXXXXXXXXXGAXPAGXXXPPX 800
             P     P  A         G   P   P                  G  P+G   PP 
Sbjct: 240 MQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPR 299

Query: 801 PPFPPLXEXXGPVXPPQ 851
           PP P   +   P  PPQ
Sbjct: 300 PPMP--MQGGAPGGPPQ 314



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = +2

Query: 647 PXRHXKXRPXXPXXXKPPXDSXGXXPGAPXXPPPGXAPXGGXPR 778
           P R     P  P   +PP +      G P  P P   P G  P+
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQP-PRPGGMYPQ 220


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
 Frame = +1

Query: 586 PKAPKXPNXRXGRXSPE-APPPXXPXXTP--PXRXXAXKTPPXFXGXXPXGPPXTAPGXX 756
           P  P  P        P+  PPP      P  P      + P  F    P   P  AP   
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNL-PNAQPPPAPPPP 588

Query: 757 PPGGXPP 777
           PP G PP
Sbjct: 589 PPMGPPP 595



 Score = 23.4 bits (48), Expect = 9.9
 Identities = 11/35 (31%), Positives = 12/35 (34%)
 Frame = -3

Query: 293 GYPLRPXFXXXPLXXPXSXXGXAPPPXFGXXXXGP 189
           G+P  P     P   P    G  P P  G    GP
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 146 KKQKPGXTPXXGGEGAPXXXGQXGGGGPXPXXXXGXKG 259
           K+ +PG      G GAP   G    GGP P    G  G
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGG-GSSGGPGPGGGGGGGG 232


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 853 FWGGXTGPXXSXRGGKGGXGG 791
           + GG  G     RGG+GG GG
Sbjct: 57  YGGGDDGYGGGGRGGRGGRGG 77


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 473 PXARPSGSGXXGHPLXXGXPGSPXXXGYXG 562
           P   P   G  GHP   G PG     G  G
Sbjct: 159 PKGEPGPKGPAGHPGAPGRPGVDGVKGLPG 188


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 482 RPSGSGXXGHPLXXGXPGSPXXXGYXG 562
           R   +G  G P   G PG+P   GY G
Sbjct: 179 RDGCNGTDGLPGLSGLPGNPGPRGYAG 205



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 149 KQKPGXTPXXGGEGAPXXXGQXGGGGPXPXXXXGXKG 259
           K +PG     G  GAP   G  G  G       G KG
Sbjct: 702 KGRPGEAGIDGAPGAPGKDGLPGRHGQTVKGEPGLKG 738



 Score = 23.4 bits (48), Expect = 9.9
 Identities = 30/144 (20%), Positives = 35/144 (24%), Gaps = 4/144 (2%)
 Frame = +2

Query: 158 PGXTPXXGGEGAPXXXGQXGGGGPXPXXXXGXKGXXXXSXXAXGTXXXPGQPXXXXXXXX 337
           PG     G  G P   G  G  G       G KG    +    G     GQ         
Sbjct: 476 PGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKGNAGMA----GFPGLKGQKGERGFKGV 531

Query: 338 LRXHXXSRDXGXGXXXFPA----SGXPADPRXXXXXXXXAKXASXPPXXPXARPSGSGXX 505
           +     +++   G    P      G P  P                      RP   G  
Sbjct: 532 MGTPGDAKEGRPGAPGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDK 591

Query: 506 GHPLXXGXPGSPXXXGYXGXHHXP 577
           G     G PG P   G  G    P
Sbjct: 592 GERGYAGEPGRPGASGVPGERGYP 615


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 704 DSXGXXPGAPXXPPPGXAPXGGXPR 778
           D  G  P  P  PP   +P GG PR
Sbjct: 778 DGIGSPPPPPPPPPSSLSP-GGVPR 801



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 721 PXGPPXTAPGXXPPGGXPPP 780
           P  PP   P    PGG P P
Sbjct: 783 PPPPPPPPPSSLSPGGVPRP 802


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 16/58 (27%), Positives = 16/58 (27%)
 Frame = +1

Query: 586 PKAPKXPNXRXGRXSPEAPPPXXPXXTPPXRXXAXKTPPXFXGXXPXGPPXTAPGXXP 759
           P  P  P    G   P  PPP      PP        PP   G  P       P   P
Sbjct: 93  PGMPGAPPLLMGPNGP-LPPPMMGMRPPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,252
Number of Sequences: 2352
Number of extensions: 9409
Number of successful extensions: 64
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)