Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E11
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 32 0.50
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.88
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.5
07_03_0890 - 22332768-22333382 30 2.7
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 29 3.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.5
09_02_0327 - 7284829-7284889,7284946-7286126 29 4.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.7
07_01_0080 + 587674-588510 29 4.7
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 4.7
04_01_0197 + 2323790-2324098,2324145-2324774 29 4.7
02_04_0242 + 21210062-21210541 29 4.7
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 29 4.7
01_05_0433 - 22094784-22095659 29 4.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 6.2
02_05_0002 - 24849189-24849825,24850267-24850328 29 6.2
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 8.2
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 28 8.2
06_01_0931 + 7192519-7194075 28 8.2
03_06_0599 + 34984869-34985319,34986581-34987563 28 8.2
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 28 8.2
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 28 8.2
>06_03_1310 + 29238644-29240260
Length = 538
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 325 GPGXXCFPXXXGXXXGXPPPPPXGXXKKIPPV 420
G G FP G PPPPP G PPV
Sbjct: 491 GGGKLPFPPVHGVAYSSPPPPPSGDKLPFPPV 522
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 638 GXPXPPPXKXXXPPPPP 588
G P PPP K PPPPP
Sbjct: 343 GPPPPPPAKGPPPPPPP 359
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 638 GXPXPPPXKXXXPPPPP 588
G P PPP K PPPPP
Sbjct: 352 GPPPPPPPKGPSPPPPP 368
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 247 PVXPXRGXAGXKPTXXXPXAXXGNXXGPGXXCFPXXXGXXXGXPPPPPXGXXKKIP 414
P P +G P P GP P G G PPPPP G + P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPK--GPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 632 PXPPPXKXXXPPPPP 588
P PPP K PPPPP
Sbjct: 327 PPPPPPKAAPPPPPP 341
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
G P PPP K PPPPP
Sbjct: 622 GAPPPPPPPGKPGGPPPPP 640
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
G P PPP K PPPPP
Sbjct: 927 GAPPPPPPPGKPGGPPPPP 945
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 594 GGXXPPLXGGGXGXPPPPXXKKXXXXXGGAPPP 692
GG PP GG G PP P GG PPP
Sbjct: 1146 GGVPPPPPVGGLGGPPAP--PPPAGFRGGTPPP 1176
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 594 GGXXPPLXGGGXGXPPPPXXKKXXXXXGGAPPP 692
GG PP GG PPPP + GG P P
Sbjct: 1171 GGTPPPNAHGGVAPPPPP--PRGHGGVGGPPTP 1201
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 265 GXAGXKPTXXXPXAXXGNXXGPGXXCFPXXXGXXXGXPPPPPXGXXKKIPP 417
G A P G PG P G G PPPPP G PP
Sbjct: 1181 GVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG-PPPPPGGRGLPAPP 1230
>07_03_0890 - 22332768-22333382
Length = 204
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 638 GXPXPPPXKXXXPPPPP 588
G P PPP + PPPPP
Sbjct: 73 GSPPPPPAEATPPPPPP 89
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 617 GGGGXGAPPPXXKKXXXXXXGGPPPP 694
GGGG G+ PP + PPPP
Sbjct: 496 GGGGGGSAPPLYQMQQKAAAAAPPPP 521
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +1
Query: 283 PTXXXPXAXXGNXXGPGXXCFPXXXGXXXGXPPPP--PXGXXKKIPP 417
P P A GPG P G G PPPP P G + PP
Sbjct: 353 PPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPP 399
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 641 GGXPXPPPXKXXXPPPPP 588
G P PPP PPPPP
Sbjct: 50 GAHPPPPPPPPPPPPPPP 67
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = -1
Query: 716 FFSPXXXXGGGGPPXXXXXFFXXXGGGX---PXPPPXKXXXPPPPP 588
F +P G PP F G P PPP PPPPP
Sbjct: 51 FLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPP 96
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 641 GGXPXPPPXKXXXPPPPP 588
G P PPP PPPPP
Sbjct: 102 GSPPPPPPPPPPPPPPPP 119
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
G P PPP PPPPP
Sbjct: 102 GSPPPPPPPPPPPPPPPPP 120
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 589 GGGGGSXXFXGGGXGXPPP 645
GGGGG+ GGG PPP
Sbjct: 74 GGGGGAASNNGGGGSAPPP 92
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 638 GXPXPPPXKXXXPPPPP 588
G P PPP PPPPP
Sbjct: 25 GNPPPPPPPPPPPPPPP 41
>02_04_0242 + 21210062-21210541
Length = 159
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 593 GGXXPXXXGGGGXGAPPPXXKKXXXXXXGGPPP 691
GG GGGG GA P ++ GG PP
Sbjct: 19 GGGRGEAGGGGGDGAGPRRRRRARRGRGGGSPP 51
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 589 GGGGGSXXFXGGGXGXPPPXXKKKXXXXXGGPPPP 693
GGGGG+ G P K+K PPPP
Sbjct: 96 GGGGGNNPSSTSEGGSVSPSRKRKSESLDDSPPPP 130
>01_05_0433 - 22094784-22095659
Length = 291
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 589 GGGGGSXXFXGGGXGXPPPXXKKKXXXXXGGPPPP 693
GGGGG GGG PPP + PPPP
Sbjct: 27 GGGGGVGGGGGGGAARPPPMVPGRV------PPPP 55
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 592 GGGGSXXFXGGGXGXPPPXXKKKXXXXXGGPPPPXXWXG 708
GGGG+ GGG G PP PP P G
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GGG P PPP PPPPP
Sbjct: 212 GGGHPHPPP----PPPPPP 226
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 632 PXPPPXKXXXPPPPP 588
P PPP + PPPPP
Sbjct: 36 PPPPPPRRRTPPPPP 50
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 632 PXPPPXKXXXPPPPP 588
P PPP + PPPPP
Sbjct: 37 PPPPPRRRTPPPPPP 51
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = -1
Query: 680 PPXXXXXFFXXXGGGXPXPPPXKXXXPPPPP 588
PP + P PPP PPPPP
Sbjct: 1139 PPAPYNCGYAGHANQMPLPPPPPPPLPPPPP 1169
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 632 PXPPPXKXXXPPPPP 588
P PPP + PPPPP
Sbjct: 132 PPPPPPRSQAPPPPP 146
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 641 GGXPXPPPXKXXXPPPPP 588
G P PPP PPPPP
Sbjct: 395 GPAPPPPPQPPPPPPPPP 412
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Frame = -1
Query: 389 GGGGGXPXXXP------XXXGKQXXPGPXKXPXXALGXXXVGFXPAXPRXGXTGARXPIN 228
GGGGG P P G PGP + G V + P GA P
Sbjct: 32 GGGGGAPPYRPASGFVWPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHHQGAYQP-G 90
Query: 227 GVNRPPS 207
GV R PS
Sbjct: 91 GVYRAPS 97
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 589 GGGGGSXXFXGGGXGXPPPXXKKKXXXXXGGPPPP 693
GGGGG GGG G P K GP P
Sbjct: 35 GGGGGGGVGGGGGGGVGPTRRPFKRSGNRAGPYQP 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,666,118
Number of Sequences: 37544
Number of extensions: 568399
Number of successful extensions: 5992
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4996
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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