Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E11
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.1  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   6.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 313 GNXXGPGXXCFPXXXGXXXGXPPPPPXGXXKKIPP 417
           G   G G        G     PPPPP G    IPP
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPP 545



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 375 PPPPPXGXX*KNPPGF 422
           PPPPP G     PP F
Sbjct: 532 PPPPPGGAVLNIPPQF 547



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 632 PXPPPXKXXXPPPPP 588
           P PPP     PPP P
Sbjct: 583 PAPPPPPPMGPPPSP 597



 Score = 22.2 bits (45), Expect(2) = 3.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 366 PXXPPPPPXG 395
           P  PPPPP G
Sbjct: 583 PAPPPPPPMG 592



 Score = 20.6 bits (41), Expect(2) = 3.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 342 FPXXXXXRPXXPPPPP 389
           FP     +P   PPPP
Sbjct: 573 FPNLPNAQPPPAPPPP 588


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 109 KSYYVIRKFRVRLFQHKIRFRIKS*GIPYSESYG 8
           KSY + R + V++ +H  +  + S G+P   + G
Sbjct: 717 KSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIG 750


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 589 GGGGGSXXFXGGGXGXPPPXXKKKXXXXXGGPPPP 693
           GGGGG     G      PP          G PP P
Sbjct: 125 GGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 589 GGGGGSXXFXGGGXGXPPP 645
           GGGGG     GGG G   P
Sbjct: 296 GGGGGGGGGGGGGGGSAGP 314


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 589 GGGGGSXXFXGGGXGXPPP 645
           GGGGG     GGG G   P
Sbjct: 296 GGGGGGGGGGGGGGGSAGP 314


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 589 GGGGGSXXFXGGGXGXPPP 645
           GGGGG     GGG G   P
Sbjct: 248 GGGGGGGGGGGGGGGSAGP 266


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 136 CSLRAIRRYKSYYVIRKFRVRLFQHKIRFRIKS*GIP 26
           CSL  ++  KSY + R + V++ +H  +  + S G+P
Sbjct: 95  CSL--VQWLKSYLINRTYIVKIDKHMSKKIVSSSGVP 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,925
Number of Sequences: 2352
Number of extensions: 11383
Number of successful extensions: 71
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)