Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E11
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 32 2.3
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 4.0
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 4.0
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 31 4.0
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 4.0
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 5.3
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 5.3
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 5.3
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 5.3
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 7.0
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 7.0
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 7.0
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 7.0
BC037223-1|AAH37223.1| 194|Homo sapiens mediator complex subuni... 30 9.2
BC009723-1|AAH09723.1| 205|Homo sapiens Unknown (protein for IM... 30 9.2
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 692 GGGGPPXXXXXFFXXXGGGXPXPP-PXKXXXPPPPP 588
GGGG P G P PP P K PPPPP
Sbjct: 5 GGGGRPGESPGASPTTGPPPPPPPRPPKQQPPPPPP 40
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 388 GGAPPPPPPPPPPGPPPPP 406
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 388 GGAPPPPPPPPPPGPPPPP 406
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 31.5 bits (68), Expect = 4.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 641 GGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 60 GGAPPPPPPPPPGPPPPP 77
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.5 bits (68), Expect = 4.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 388 GGAPPPPPPPPPPGPPPPP 406
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 692 GGGGPPXXXXXFFXXXGGGXPXPPPXKXXXPPPPP 588
GGGG P G P PP PPPPP
Sbjct: 5 GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPP 39
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 692 GGGGPPXXXXXFFXXXGGGXPXPPPXKXXXPPPPP 588
GGGG P G P PP PPPPP
Sbjct: 5 GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPP 39
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 692 GGGGPPXXXXXFFXXXGGGXPXPPPXKXXXPPPPP 588
GGGG P G P PP PPPPP
Sbjct: 5 GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPP 39
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 692 GGGGPPXXXXXFFXXXGGGXPXPPPXKXXXPPPPP 588
GGGG P G P PP PPPPP
Sbjct: 5 GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPP 39
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 30.7 bits (66), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 285 GGPPPPPPPPHSSGPPPPP 303
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 30.7 bits (66), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 285 GGPPPPPPPPHNSGPPPPP 303
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 285 GGPPPPPPPPHNSGPPPPP 303
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 30.7 bits (66), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 644 GGGXPXPPPXKXXXPPPPP 588
GG P PPP PPPPP
Sbjct: 285 GGPPPPPPPPHNSGPPPPP 303
>BC037223-1|AAH37223.1| 194|Homo sapiens mediator complex subunit
19 protein.
Length = 194
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 606 PPLXGGGXGXPPPPXXKKXXXXXGGAPPP 692
P G G G PPPP G APPP
Sbjct: 18 PTALGFGPGKPPPPPPPPAGGGPGTAPPP 46
>BC009723-1|AAH09723.1| 205|Homo sapiens Unknown (protein for
IMAGE:3895048) protein.
Length = 205
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 606 PPLXGGGXGXPPPPXXKKXXXXXGGAPPP 692
P G G G PPPP G APPP
Sbjct: 18 PTALGFGPGKPPPPPPPPAGGGPGTAPPP 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,048,801
Number of Sequences: 237096
Number of extensions: 2541585
Number of successful extensions: 17667
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13937
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -