Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_E03
         (959 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.12 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 881 GGXGXPXPPGGGGGXSXXAPGGG 949
           GG G   P GGGG      PGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 881 GGXGXPXPPGGGGG 922
           G  G P P GGGGG
Sbjct: 217 GSSGGPGPGGGGGG 230



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 882 GGXAPXXPPGGGGGXXXXPRGVXPGG 959
           GG +    PGGGGG    P    PGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGP---GPGG 226


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 939 GAXXXXPPPPPGGXGXPXPP 880
           G     PPPPPGG     PP
Sbjct: 526 GPLGPPPPPPPGGAVLNIPP 545



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
 Frame = -1

Query: 959 PAGXHPPGPXXXXPP-PPRGXXGXPPPQXXXGXXXXGXXGGGXP 831
           PAG  P  P    PP PP      PPP    G    G  G   P
Sbjct: 570 PAGF-PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 942 PGAXXXXPPPPPGGXGXPXPPXXXG 868
           P A     PPPP   G P  P   G
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGG 601


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 842 PXXPXSXSXPXXXGGXGXPXPPGGGG 919
           P  P S   P   G  G P PPG  G
Sbjct: 130 PGLPGSLGYPGEKGDLGTPGPPGYPG 155



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -3

Query: 939 GAXXXXPPPPPGGXGXPXPPXXXGXEXEXGXXG 841
           G     P  PP   G P PP   G + + G  G
Sbjct: 702 GQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPG 734



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = -3

Query: 942 PGAXXXXPPPPPGGXGXPXPPXXXGXEXEXGXXG 841
           PG     PP P G  G   P    G   + G  G
Sbjct: 98  PGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPG 131


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 902  PPGGGGGXSXXAPGGG 949
            PP  GGG +  A GGG
Sbjct: 1300 PPNDGGGAAAAAAGGG 1315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,892
Number of Sequences: 2352
Number of extensions: 8353
Number of successful extensions: 86
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105430005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)