Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_E01
(973 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.076
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.31
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 33 0.41
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.71
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 1.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.6
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 6.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 6.6
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.7
AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like ... 28 8.7
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 35.1 bits (77), Expect = 0.076
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 925 GGPPXPXGXGGGGXKXXXPPPPXGGGG 845
GG G GGG + PPPP GGGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGG 222
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 904 GXGGGGXKXXXPPPPXGGGGG 842
G GGG PPPP GGGG
Sbjct: 202 GGSGGGSGRFPPPPPPYGGGG 222
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 851 PPXGGGGXXXFXSPPPXPXGXGGP 922
P GGGG PPP P G GGP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGP 43
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP G GG
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGG 845
+ GGPP P GG PPPP GG
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP GG
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGG---PPXXKQKIFFSFXRPPXP 973
P PP GG PPP P GG PP F PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGGPPXXKQKIFFSFXRPPXP 973
P PP GG PPP GGPP F+ P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP G GG
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGG 845
+ GGPP P GG PPPP GG
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP GG
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGG---PPXXKQKIFFSFXRPPXP 973
P PP GG PPP P GG PP F PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGGPPXXKQKIFFSFXRPPXP 973
P PP GG PPP GGPP F+ P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP G GG
Sbjct: 337 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGG 845
+ GGPP P GG PPPP GG
Sbjct: 305 ITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 931 VXGGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
+ GGPP P GG PPPP GG
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGG---PPXXKQKIFFSFXRPPXP 973
P PP GG PPP P GG PP F PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGGPPXXKQKIFFSFXRPPXP 973
P PP GG PPP GGPP F+ P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.41
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 904 GXGGGGXKXXXPPPPXGGG-GGXXKXXXXXXPAXKKXXGG 788
G GGGG PPPP GGG GG A + GG
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGG 61
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/77 (27%), Positives = 23/77 (29%)
Frame = +2
Query: 743 PXLFLXPPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGP 922
P F+ PP PPP P PP GG PPP P P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGI-----PPPPPMFGAPP 115
Query: 923 PXXKQKIFFSFXRPPXP 973
P +PP P
Sbjct: 116 PPPPPSGLGVAPQPPRP 132
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 934 FVXGGPPXPXGXGGGGXKXXXPPPPXGG 851
F G PP P G G G PPPP GG
Sbjct: 751 FNAGAPPPPFGR-GAGPMSSFPPPPRGG 777
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXX-FXSPPPXPXGXGGPP 925
PPP PPP P PP GG SPPP P G PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXX-FXSPPPXPXGXGGPP 925
PPP PPP P PP GG SPPP P G PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXX-FXSPPPXPXGXGGPP 925
PPP PPP P PP GG SPPP P G PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 851 PPXGGGGXXXFXSPPPXPXGXGGP 922
P GGGG PPP P G G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 851 PPXGGGGXXXFXSPPPXPXGXGGP 922
P GGGG PPP P G G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 925 GGPPXPXGXGGGGXKXXXPPPP 860
GGPP G GGGG P PP
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 925 GGPPXPXGXGGGGXKXXXPPPP 860
GGPP G GGGG P PP
Sbjct: 625 GGPPRGPGGGGGGGPTGPPAPP 646
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 919 PPXPXGXGGGGXKXXXPPPPXGGGGG 842
P P G GGG + PPP GGGGG
Sbjct: 261 PTNPMGGGGGYPQ---PPPQQGGGGG 283
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 919 PPXPXGXGGGGXKXXXPPPPXGGGGG 842
PP P GGG + PPPP GG
Sbjct: 40 PPPPPPPCGGGYEAPPPPPPPSYAGG 65
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 845 PSPPXGGGGXXXFXSPPPXPXGXGGP 922
P PP GG PPP P GGP
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGGP 66
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXG----GGGXXXFXSPPPXPXGXGGPPX 928
PPP PPP P PP G G G PPP P G GGP
Sbjct: 609 PPPPPP--PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP-PPPPPPPSGAGGPAS 665
Query: 929 XKQKI 943
K+
Sbjct: 666 VLAKL 670
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = -1
Query: 919 PPXPXGXG--GGGXKXXXPPPPXGGGGG 842
PP P G G G PPPP G GG
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXG----GGGXXXFXSPPPXPXGXGGPPX 928
PPP PPP P PP G G G PPP P G GGP
Sbjct: 435 PPPPPP--PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP-PPPPPPPSGAGGPAS 491
Query: 929 XKQKI 943
K+
Sbjct: 492 VLAKL 496
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = -1
Query: 919 PPXPXGXG--GGGXKXXXPPPPXGGGGG 842
PP P G G G PPPP G GG
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 925 GGPPXPXGXGG--GGXKXXXPPPPXGGGGG 842
GGPP G GG G PPP GG GG
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 925 GGPPXPXGXGG--GGXKXXXPPPPXGGGGG 842
GGPP G GG G PPP GG GG
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 743 PXLFLXPPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGP 922
P F PPP+ PPP P PP G G PPP P G
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFM----PPPPHFGMGPPRGFMPPPHPMMFRGG 347
Query: 923 P 925
P
Sbjct: 348 P 348
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 743 PXLFLXPPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGP 922
P F PPP+ PPP P PP G G PPP P G
Sbjct: 292 PFGFFPPPPRGHFPPPPPHFMGRGMPPPFM----PPPPHFGMGPPRGFMPPPHPMMFRGG 347
Query: 923 P 925
P
Sbjct: 348 P 348
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Frame = -1
Query: 919 PPXPXGXGGGG--XKXXXPP---PPXGGGGG 842
PP P G GGGG PP P GGGGG
Sbjct: 35 PPSPCGCGGGGGLALPQLPPLSLPSLGGGGG 65
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGPP 925
PP PPP P PP PPP P GGPP
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPP 590
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 925 GGPPXPXGXGGGGXKXXXPPPPXGGGGG 842
GGP G GGGG GGGGG
Sbjct: 780 GGPTGSSGGGGGGGNGGSGGGGGGGGGG 807
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 761 PPPKKX-XXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGPPXXKQ 937
PPPK PPP P PP G G +PPP P G P
Sbjct: 160 PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTG-----TPPPPPT---GEPQDLS 211
Query: 938 KIFFSFXRPPXP 973
++ RPP P
Sbjct: 212 AEGYASRRPPPP 223
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 904 GXGGGGXKXXXPPPPXGGGGG 842
G GGGG PPPP GG G
Sbjct: 36 GGGGGGCCAPPPPPPVCGGCG 56
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = -1
Query: 910 PXGXGGGGXKXXXPPPPX---GGGGG 842
P G GGG PPPP GGGGG
Sbjct: 20 PSGGGGGCGCAPPPPPPACGCGGGGG 45
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/55 (27%), Positives = 17/55 (30%)
Frame = +2
Query: 761 PPPKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGXGGPP 925
PPP++ PPP P GG PP G GPP
Sbjct: 592 PPPQQQQGPPPNWRHQGPPMSGPGQGYGPPGRMGGNQGGWQRPPPQGSYGGQGPP 646
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Frame = -2
Query: 927 WGGPPXPXGXGG-------GEXKXXXPPPPXGGE 847
W GPP P G G G + PPPP G +
Sbjct: 75 WRGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGAD 108
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Frame = +2
Query: 851 PPXGGGGXXXFXSPP------PXPXGXGGPPXXKQKIFFSFXRPP 967
PP GG F +PP P P GGPP +F PP
Sbjct: 338 PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPP 382
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = +2
Query: 743 PXLFLXPP---PKKXXXPPPXXXXXXXXXXXXXXXXXPSPPXGGGGXXXFXSPPPXPXGX 913
P F PP P PPP P PP G G + P P G
Sbjct: 375 PGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP-PPGGPGAPGSYGPPQGGPGGF 433
Query: 914 GGPP 925
G PP
Sbjct: 434 GPPP 437
>AF068713-12|AAC17802.1| 139|Caenorhabditis elegans Ground-like
(grd related) protein28 protein.
Length = 139
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 898 GGGGXKXXXPPPPXGGGGGXXK 833
GGGG PPPP G GG K
Sbjct: 27 GGGGCGCGAPPPPSCGCGGRKK 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,332,108
Number of Sequences: 27780
Number of extensions: 215739
Number of successful extensions: 2053
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -