Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D20
(948 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.025
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.078
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.31
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.31
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.55
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.55
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.55
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 1.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 1.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 2e-04
Identities = 43/168 (25%), Positives = 46/168 (27%)
Frame = +2
Query: 368 PFXQQPXPPFXXPXPPGXGXXXXSPXXXSXXPAXXGGGXXGXSSXSXXTXPPPAXXRLXX 547
P P PP P PP SP P +S S PPP+ R+
Sbjct: 246 PSLSAPAPP---PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSS-RVSA 301
Query: 548 XAXPPPXGXXXPPPXXGXXXXXTSPPXAXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXX 727
A PPP PP P G P PP P
Sbjct: 302 AALAANKKRPPPPP----------PPSRRNRGKPPIGNGSSNSSLPPPPP---PPRSNAA 348
Query: 728 XXXXXPPPPPPXXPPPXPXXXPPXGGXXXXPXPXXXXXXXXXPPFPPP 871
PP PPP P P G P P PP PPP
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTG---RQPPPLSSSRAVSNPPAPPP 393
Score = 35.5 bits (78), Expect = 0.011
Identities = 31/131 (23%), Positives = 34/131 (25%), Gaps = 5/131 (3%)
Frame = +2
Query: 488 GXSSXSXXTXPPPAXXRLXXXAXPPPXGXXXPPPXXGXXXXXTS---PPXAXXXP--SPX 652
G S+ S PPP PP G PPP T PP + +P
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 653 XGXXXRXXXXXPRPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPPXGGXXXXPXPXX 832
P P PP PP PP P PP P
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 833 XXXXXXXPPFP 865
PP P
Sbjct: 450 PPSAPIAPPLP 460
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 510 PXPPPPRXGXXGXXPXPPXXAXXXPP 587
P PPPPR G P PP PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 31.1 bits (67), Expect = 0.24
Identities = 26/95 (27%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Frame = +2
Query: 518 PPPAXXRLXXXAXPPPXGXXX---PPPXXGXXXXXTSPPXAXXXPSPXXGXXXRXXXXXP 688
PPPA A PP PP ++PP PS P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP--PSAPPSLPMGAPAAPP 448
Query: 689 RPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXP 793
PP P P PP PP P P P P
Sbjct: 449 LPPSA-PIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 30.3 bits (65), Expect = 0.41
Identities = 35/142 (24%), Positives = 36/142 (25%), Gaps = 1/142 (0%)
Frame = +2
Query: 518 PPPAXXRLXXXAXPPPXGXXXPPPXXGXXXXXTSPPXAXXXPSPXXGXXXRXXXXXPRPP 697
PP L A PP PPP G + P P PP
Sbjct: 241 PPERVPSLSAPAPPP-----IPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Query: 698 XXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPPXG-GXXXXPXPXXXXXXXXXPPFPPPX 874
PPPPPP P PP G G P PP PPP
Sbjct: 296 SSRVSAAALAANKKRPPPPPP--PSRRNRGKPPIGNGSSNSSLP---------PPPPPPR 344
Query: 875 GXXXXXXXXPXXGXXXXPLXXP 940
P G P P
Sbjct: 345 SNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/65 (26%), Positives = 17/65 (26%), Gaps = 3/65 (4%)
Frame = +2
Query: 686 PRPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPPXGGXXXXPXP---XXXXXXXXXP 856
P PP P P PPP PP P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 857 PFPPP 871
P PPP
Sbjct: 291 PLPPP 295
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.025
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Frame = +2
Query: 743 PPPPPPXX--------PPPXPXXXPPXGGXXXXPXPXXXXXXXXXPPFPPP 871
PPPPPP P P P P GG P P PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 686 PRPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPPXGGXXXXPXP 826
P PP P PPP P PP P P G P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 504 PXPXPPPPRXGXXGXXPXPPXXAXXXPPXXRGXXXXXPPPXXP 632
P P P PP G P PP PP G PPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPP-----PPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 685 PPPPXXXTQXXXPXXXXXXPPPPPPXXXXPXPXXXPP 795
PPPP P PPP P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 7/54 (12%)
Frame = +2
Query: 686 PRP-PXXXPXXXPXXXXXXXPPPPP------PXXPPPXPXXXPPXGGXXXXPXP 826
P P P P P PPPPP P PPP P G P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 620 PPXAXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXXXXXXXPPPPPPXXPPP 775
PP A P+P P P P P PPPP PPP
Sbjct: 735 PPPAVIVPTPAPAPIP---VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 6/66 (9%)
Frame = +3
Query: 516 PPPPRXGXXGXXPXPPXXAXXXPPXXRGXXXXXPPP------XXPXXXXPPKXGXXXGNX 677
PPPP P P P G PPP P PP G+
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 678 XXXPAP 695
PAP
Sbjct: 792 YYAPAP 797
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Frame = +2
Query: 686 PRP-PXXXPXXXPXXXXXXXPPPPPP---XXPPPXPXXXPP 796
P P P P P PPPPPP P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.078
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 692 PPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPPXGGXXXXPXP 826
PP P PPPPP PPP P P G P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 686 PRPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPP 796
P PP P P PP PPP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 743 PPPPPPXXPPPXPXXXPPXG 802
PPPPP PP P PP G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 743 PPPPPPXXPPPXPXXXPPXGG 805
PPPPPP PP PP G
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 742 PPPPPPXXXXPXPXXXPP 795
PPPPPP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 742 PPPPPPXXXXPXPXXXPP 795
PPPPPP P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Frame = +1
Query: 685 PPPPXXXTQXXXPXXXXXXPPPPPPXXXXPXPXXX---PPLGGXPXXXXXXXXXPXXXXP 855
PP P P PP P P P P PP+ P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVP 1189
Query: 856 PLPPP 870
P+PPP
Sbjct: 1190 PVPPP 1194
Score = 29.5 bits (63), Expect = 0.72
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +1
Query: 685 PPPPXXXTQXXXPXXXXXXPPPPPPXXXXPXPXXXPPLGGXPXXXXXXXXXPXXXXPPLP 864
PP P P PP PPP P P P G P P PP+P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP---TPSAGLP-----PVPVPTAKAPPVP 1240
Query: 865 PP 870
P
Sbjct: 1241 AP 1242
Score = 26.6 bits (56), Expect = 5.1
Identities = 39/178 (21%), Positives = 42/178 (23%), Gaps = 3/178 (1%)
Frame = +2
Query: 272 GPPPTXXPXXXPXXXTIGGAXCPPXXHXRXXKPFXQQPXPPFXXPXPPGXGXXXXSPXXX 451
G PP P P A PP KP P P PP +P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVA-APPVP-----KPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Query: 452 --SXXPAXXGGGXXGXSSXSXXTXPPPAXXRLXXXAXPPPXGXXXPPPXXGXXXXXTSPP 625
S P + PP + P P P P PP
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 626 X-AXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXXXXXXXPPPPPPXXPPPXPXXXPP 796
A P P G P P P P P P P P P P
Sbjct: 1195 SEAPPVPKPSVGVPP-----VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/105 (20%), Positives = 23/105 (21%)
Frame = +2
Query: 557 PPPXGXXXPPPXXGXXXXXTSPPXAXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXXXXX 736
P P PP +SP P + P P P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 737 XXPPPPPPXXPPPXPXXXPPXGGXXXXPXPXXXXXXXXXPPFPPP 871
P P P PP P P P PPP
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.55
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -3
Query: 631 GXXGGGXXXXXPRXXGGXXXAXXGGXGXXPQXPXRGGGGXGXGXXRXXXXXPAXXXGXXG 452
G GGG P G GG G GG G G G G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGH--HHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 451 XXXGGXXXXPXSRGGG 404
GG P GGG
Sbjct: 249 GGLGGFGGGPGGFGGG 264
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = -2
Query: 920 GXXXXGXXXXXXPRXPXG-GGRGGXXXXGXXXXXXXXXGXPPRGGXXXGXGXXFXGGGGG 744
G G P P G GG GG G G P GG G G GGG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP-GGFEGGPGGF--GGGPG 245
Query: 743 GXXXXXXGXXXWVXXXGGG 687
G G GGG
Sbjct: 246 GFGGGLGGFGGGPGGFGGG 264
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 874 PGGGEGGGXXXXXXXXGXXXXXGPPXGGXXXXGGGXXXGGGGG 746
PGG EGG G G GG GGG GG G
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = -3
Query: 868 GGEGGGXXXXXXXXGXXXXXGPPXGGXXXXGGGXXXGGGGGGXXXXXXXGXXXGXXXXGA 689
GG GGG G G G GG GGG GG G G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG-FEGGPGGFGGGPGGFGG 249
Query: 688 GXXXXXPXXXPXXGGXXXXGXXG 620
G GG G G
Sbjct: 250 GLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -1
Query: 870 GGGKGGXXXXXXXXXGXGXXXXPPXGGXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGG 691
GGG GG G G G GG GG GG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 690 RG 685
G
Sbjct: 254 FG 255
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.55
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 938 GRXGXXGXXXXGXXXXXXPRXPXGGGRGGXXXXGXXXXXXXXXGXPPRGGXXXGXGXXFX 759
G G G G R GGGRGG G G RGG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG---RGGARGGRGGSSG 62
Query: 758 GGGG 747
G GG
Sbjct: 63 GRGG 66
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = -1
Query: 870 GGGKGGXXXXXXXXXGXGXXXXPPXGGXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGG 691
GG +GG G G GG G GG G GG G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Query: 690 R 688
+
Sbjct: 72 K 72
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 792 GXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGGRG 685
G G GGG G GGG G GGRG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 795 GGXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGGRG 685
GG G GG GG GG G GGRG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = -3
Query: 868 GGEGGGXXXXXXXXGXXXXXGPPXGGXXXXGGGXXXGGGGGGXXXXXXXGXXXGXXXXGA 689
GG GG G G GG G G GG GG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 688 G 686
G
Sbjct: 69 G 69
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -1
Query: 792 GXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGGRGXXXXXRXXXPXXGXGXXXAXGG 619
G G GG G GG G G GGRG R G + GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 795 GGXXXGXGGGXXGGGGGGXXXXXXXGXXLGXXXGGRG 685
GG G GG GG GG G G G G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.55
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = -1
Query: 876 PXG-GGKGGXXXXXXXXXGXGXXXXPPXGGXXXGXGGGXXGGGGGGXXXXXXXGXXLGXX 700
P G GG+GG G G G G GGG GG GGG G G
Sbjct: 134 PAGRGGRGGFRG------GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Query: 699 XGGRG 685
G RG
Sbjct: 188 GGFRG 192
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 743 PPPPPPXXPP 772
PPPPPP PP
Sbjct: 239 PPPPPPTLPP 248
Score = 24.2 bits (50), Expect(2) = 1.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 743 PPPPPPXXPPP 775
PPPPPP PPP
Sbjct: 189 PPPPPP--PPP 197
Score = 23.0 bits (47), Expect(2) = 1.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 752 PPPXXPPPXPXXXPP 796
P P PPP P PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/90 (22%), Positives = 20/90 (22%)
Frame = +2
Query: 551 AXPPPXGXXXPPPXXGXXXXXTSPPXAXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXXX 730
A P P PP P A P P P P P
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 731 XXXXPPPPPPXXPPPXPXXXPPXGGXXXXP 820
PP P PP P P P
Sbjct: 189 SLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/91 (23%), Positives = 23/91 (25%)
Frame = +2
Query: 596 GXXXXXTSPPXAXXXPSPXXGXXXRXXXXXPRPPXXXPXXXPXXXXXXXPPPPPPXXPPP 775
G +PP A P+P PRP P PP P PPP
Sbjct: 116 GKSSASAAPPSAPAPPTPQ-SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Query: 776 XPXXXPPXGGXXXXPXPXXXXXXXXXPPFPP 868
P P P PP
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/100 (21%), Positives = 23/100 (23%), Gaps = 2/100 (2%)
Frame = +1
Query: 505 LXHXPPPRGXAXXXXGXXPPXXXXXXPPXXGGXRXXHLPPXXXXXXXPXXXAXXPXXXXX 684
L H A PP P +PP P P
Sbjct: 112 LRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSL 171
Query: 685 PPPPXXXTQXXXPXXXXXXPP--PPPPXXXXPXPXXXPPL 798
PPP P P PP P P P P+
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 504 PXPXPPPPRXGXXGXXPXPP 563
P P PPPP P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 743 PPPPPPXXPPPXPXXXPP 796
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 869 GGGRGGXXXXGXXXXXXXXXGXPPRGGXXXGXGXXFXGGGGGG 741
GGG GG G RGG G GGGG G
Sbjct: 140 GGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAG 182
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,940,285
Number of Sequences: 5004
Number of extensions: 32040
Number of successful extensions: 397
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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