Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D19
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Q7 Cluster: Isopentenyl-diphosphate delta isomerase... 87 4e-16
UniRef50_A4UU28 Cluster: Isopentenyl diphosphate isomerase; n=1;... 68 3e-10
UniRef50_Q56CY5 Cluster: IPP:DMAPP isomerase; n=4; Endopterygota... 66 1e-09
UniRef50_UPI00015B59B1 Cluster: PREDICTED: similar to ENSANGP000... 58 4e-07
UniRef50_A0APV5 Cluster: CG5919 protein; n=6; Endopterygota|Rep:... 57 7e-07
UniRef50_P15496 Cluster: Isopentenyl-diphosphate Delta-isomerase... 48 2e-04
UniRef50_Q6B8H5 Cluster: Isopentenyl-diphosphate delta-isomerase... 46 0.001
UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase... 43 0.009
UniRef50_P93355 Cluster: Isopentenyl pyrophosphate isomerase; n=... 43 0.012
UniRef50_Q42553 Cluster: Isopentenyl-diphosphate Delta-isomerase... 42 0.020
UniRef50_Q4J492 Cluster: Isopentenyl-diphosphate delta-isomerase... 42 0.027
UniRef50_UPI0000E22286 Cluster: PREDICTED: similar to isopenteny... 41 0.047
UniRef50_Q13907 Cluster: Isopentenyl-diphosphate Delta-isomerase... 41 0.047
UniRef50_Q8SSI5 Cluster: ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE... 40 0.062
UniRef50_Q5KPJ7 Cluster: Isopentenyl-diphosphate delta-isomerase... 40 0.083
UniRef50_UPI0000DA400D Cluster: PREDICTED: similar to isopenteny... 39 0.14
UniRef50_Q11XA5 Cluster: Isopentenyl-diphosphate delta-isomerase... 39 0.14
UniRef50_Q9BI81 Cluster: Isopentenyl diphosphate isomerase prote... 38 0.25
UniRef50_Q9BXS1 Cluster: Isopentenyl-diphosphate Delta-isomerase... 38 0.25
UniRef50_UPI00006CCBBC Cluster: isopentenyl-diphosphate delta-is... 38 0.33
UniRef50_UPI00015535B1 Cluster: PREDICTED: hypothetical protein;... 37 0.77
UniRef50_O81691 Cluster: Isopentenyl pyrophosphate:dimethylallyl... 36 1.0
UniRef50_Q8KZ66 Cluster: Isopentenyl-diphosphate delta-isomerase... 36 1.8
UniRef50_A1ZX54 Cluster: Isopentenyl-diphosphate delta-isomerase... 35 2.3
UniRef50_Q7N0A6 Cluster: Isopentenyl-diphosphate Delta-isomerase... 35 2.3
UniRef50_O42641 Cluster: Isopentenyl-diphosphate Delta-isomerase... 35 3.1
UniRef50_Q1JYN2 Cluster: NUDIX hydrolase; n=2; Desulfuromonadale... 34 4.1
UniRef50_A6CD79 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A2EXQ9 Cluster: Isopentenyl-diphosphate delta-isomerase... 34 4.1
UniRef50_UPI0000E2279B Cluster: PREDICTED: similar to isopenteny... 34 5.4
UniRef50_A0CI91 Cluster: Chromosome undetermined scaffold_19, wh... 34 5.4
UniRef50_Q6J177 Cluster: Putative isopentenyl diphosphate isomer... 33 7.2
UniRef50_P24550 Cluster: Protein rcp; n=1; Vibrio cholerae|Rep: ... 33 7.2
UniRef50_Q8A0P9 Cluster: Putative NTP pyrophosphohydrolase; n=8;... 33 9.5
UniRef50_Q5C0D7 Cluster: SJCHGC09251 protein; n=1; Schistosoma j... 33 9.5
>UniRef50_Q2F5Q7 Cluster: Isopentenyl-diphosphate delta isomerase;
n=2; Bombyx mori|Rep: Isopentenyl-diphosphate delta
isomerase - Bombyx mori (Silk moth)
Length = 248
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVH 740
KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQ+ K TYPD + P++
Sbjct: 64 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSHPLY 119
Score = 77.4 bits (182), Expect = 4e-13
Identities = 63/145 (43%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Frame = +1
Query: 382 MLVRKLTRSLWSTLRVEKRFLASEPVKPATLDKDGXXXXXXXXXXXRYLPAS**KGQLHX 561
MLVRKLTRSLWSTLRVEKRFLASEPVKPATLDKDG K
Sbjct: 1 MLVRKLTRSLWSTLRVEKRFLASEPVKPATLDKDGLELAQAEALDKDICLLVDEKDNFIG 60
Query: 562 ERLQRE-NVIK*DLMVMCYSIEHSVFSSSTREVICSFRRRSSQKVHIP--IXHKCLLQPS 732
+RE + + D V+ + SVF + R + +RRSSQKV P + C P
Sbjct: 61 TATKRECHKVGPDGDVLLHR-AFSVFLFNKRGDM-FLQRRSSQKVTYPDYYTNACCSHP- 117
Query: 733 LYIDXXP-RXHNGSQT*DDHXXGIP 804
LYID P ++ +H GIP
Sbjct: 118 LYIDEKPEEIITAARRRMNHELGIP 142
Score = 46.4 bits (105), Expect = 0.001
Identities = 34/91 (37%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +2
Query: 515 NKDICLLVDEKDNFIXNGYKERMS*SRT*W*CATP*SIQCFPLQQER*YVPSEGDQAKKY 694
+KDICLLVDEKDNFI K + F + K
Sbjct: 45 DKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVT 104
Query: 695 ISRXYTNACCSHPC-T*MXXRGXITAARRRM 784
YTNACCSHP ITAARRRM
Sbjct: 105 YPDYYTNACCSHPLYIDEKPEEIITAARRRM 135
>UniRef50_A4UU28 Cluster: Isopentenyl diphosphate isomerase; n=1;
Adonis aestivalis var. palaestina|Rep: Isopentenyl
diphosphate isomerase - Adonis aestivalis var.
palaestina
Length = 244
Score = 68.1 bits (159), Expect = 3e-10
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPD 704
K CH V PDG++LLHRAFSVFLFN +GD+ LQK K TYPD
Sbjct: 54 KSTCHIVSPDGNLLLHRAFSVFLFNSKGDLLLQKRASAKVTYPD 97
>UniRef50_Q56CY5 Cluster: IPP:DMAPP isomerase; n=4;
Endopterygota|Rep: IPP:DMAPP isomerase - Dendroctonus
jeffreyi (Jeffrey pine beetle)
Length = 252
Score = 66.1 bits (154), Expect = 1e-09
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPD 704
KR+CH V DG++ LHRAFSVFLFN++GD+ LQK K TYPD
Sbjct: 59 KRDCHLVQEDGNIPLHRAFSVFLFNQKGDLLLQKRSSEKITYPD 102
>UniRef50_UPI00015B59B1 Cluster: PREDICTED: similar to
ENSANGP00000011643; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011643 - Nasonia
vitripennis
Length = 290
Score = 57.6 bits (133), Expect = 4e-07
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
K+ CH + DG + LHRAFSVFLFN +GD+ +QK K T+P
Sbjct: 99 KKHCHLIAKDGSIPLHRAFSVFLFNGKGDLLIQKRSATKITFP 141
>UniRef50_A0APV5 Cluster: CG5919 protein; n=6; Endopterygota|Rep:
CG5919 protein - Drosophila melanogaster (Fruit fly)
Length = 256
Score = 56.8 bits (131), Expect = 7e-07
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 573 KRECHKVGPD-GDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVH 740
K +CH+V P+ DV LHRAFSVFLFN +G+M +QK K T+P+ + P++
Sbjct: 66 KADCHRVHPETNDVKLHRAFSVFLFNSQGEMLVQKRSSHKITFPNTYTNACCSHPLY 122
>UniRef50_P15496 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=31; Eukaryota|Rep: Isopentenyl-diphosphate
Delta-isomerase - Saccharomyces cerevisiae (Baker's
yeast)
Length = 288
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPD 704
K+ CH + LLHRAFSVF+FN++G++ LQ+ K T+PD
Sbjct: 89 KKVCHLMENIEKGLLHRAFSVFIFNEQGELLLQQRATEKITFPD 132
>UniRef50_Q6B8H5 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Ixodes pacificus|Rep: Isopentenyl-diphosphate
delta-isomerase - Ixodes pacificus (western blacklegged
tick)
Length = 265
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
K++CH + LLHRAFSVFLFN + ++ LQ+ K T+P
Sbjct: 68 KKDCHLMTNINKGLLHRAFSVFLFNSKDELLLQQRSDAKITFP 110
>UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase II
precursor; n=1; Guillardia theta|Rep:
Isopentenyl-diphosphate delta-isomerase II precursor -
Guillardia theta (Cryptomonas phi)
Length = 215
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 573 KRECHKV-GPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVH 740
K+ CH + LHRAFS+FLFN RG++ LQK K +P+ + P++
Sbjct: 115 KKYCHLMENISAGKALHRAFSIFLFNGRGELLLQKRSSDKILFPNRWTNTCCSHPLY 171
>UniRef50_P93355 Cluster: Isopentenyl pyrophosphate isomerase; n=1;
Nicotiana tabacum|Rep: Isopentenyl pyrophosphate
isomerase - Nicotiana tabacum (Common tobacco)
Length = 219
Score = 42.7 bits (96), Expect = 0.012
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 573 KRECHKVGP-DGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVHR 743
K CH + + + LLHRAFSVFLFN + ++ LQ+ K T+P + P++R
Sbjct: 93 KYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYR 150
>UniRef50_Q42553 Cluster: Isopentenyl-diphosphate Delta-isomerase
II; n=63; Magnoliophyta|Rep: Isopentenyl-diphosphate
Delta-isomerase II - Arabidopsis thaliana (Mouse-ear
cress)
Length = 284
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 573 KRECHKV-GPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVHR 743
K CH + + LLHRAFSVFLFN + ++ LQ+ K T+P + P++R
Sbjct: 88 KYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYR 145
>UniRef50_Q4J492 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Azotobacter vinelandii AvOP|Rep:
Isopentenyl-diphosphate delta-isomerase - Azotobacter
vinelandii AvOP
Length = 213
Score = 41.5 bits (93), Expect = 0.027
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 603 GDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
G LLHRAFS+F+FN+RG++ LQ+ K +P
Sbjct: 63 GQGLLHRAFSLFVFNRRGELLLQQRAAGKRLWP 95
>UniRef50_UPI0000E22286 Cluster: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase; n=1; Pan
troglodytes|Rep: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase - Pan
troglodytes
Length = 385
Score = 40.7 bits (91), Expect = 0.047
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
K+ CH LLHRAFSVFLFN + LQ+ K T+P
Sbjct: 246 KKNCHLNENIEKGLLHRAFSVFLFNTENKLLLQQRSDAKITFP 288
>UniRef50_Q13907 Cluster: Isopentenyl-diphosphate Delta-isomerase 1;
n=25; Eumetazoa|Rep: Isopentenyl-diphosphate
Delta-isomerase 1 - Homo sapiens (Human)
Length = 227
Score = 40.7 bits (91), Expect = 0.047
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
K+ CH LLHRAFSVFLFN + LQ+ K T+P
Sbjct: 36 KKNCHLNENIEKGLLHRAFSVFLFNTENKLLLQQRSDAKITFP 78
>UniRef50_Q8SSI5 Cluster: ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE
II; n=1; Encephalitozoon cuniculi|Rep:
ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE II -
Encephalitozoon cuniculi
Length = 229
Score = 40.3 bits (90), Expect = 0.062
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 615 LHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LHRAFSVFLFN RG++ +Q+ K +P
Sbjct: 34 LHRAFSVFLFNSRGELLIQRRASRKLLFP 62
>UniRef50_Q5KPJ7 Cluster: Isopentenyl-diphosphate delta-isomerase,
putative; n=1; Filobasidiella neoformans|Rep:
Isopentenyl-diphosphate delta-isomerase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 265
Score = 39.9 bits (89), Expect = 0.083
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKR-GDMFLQKEIKPKSTYP 701
K+ CH + LLHRAFSVFLF G + LQK K T+P
Sbjct: 55 KKVCHLMSNINTGLLHRAFSVFLFRPADGRLLLQKRADEKITFP 98
>UniRef50_UPI0000DA400D Cluster: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase 2; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase 2 - Rattus
norvegicus
Length = 223
Score = 39.1 bits (87), Expect = 0.14
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
KR CH+ LLHRAFSV LFN + +Q+ K T+P
Sbjct: 36 KRNCHQNKNIEKGLLHRAFSVALFNSEKKVLIQRRADTKLTFP 78
>UniRef50_Q11XA5 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=9; Bacteroidetes|Rep: Isopentenyl-diphosphate
delta-isomerase - Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469)
Length = 177
Score = 39.1 bits (87), Expect = 0.14
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
K E H+ G LLHRAFSVF+FN +G++ LQ+ K P
Sbjct: 22 KMEAHRKG-----LLHRAFSVFIFNTKGELLLQQRAASKYHSP 59
>UniRef50_Q9BI81 Cluster: Isopentenyl diphosphate isomerase protein
1; n=2; Caenorhabditis|Rep: Isopentenyl diphosphate
isomerase protein 1 - Caenorhabditis elegans
Length = 236
Score = 38.3 bits (85), Expect = 0.25
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYPDXTQMLAAAIPVH 740
KRE H ++LHRAFSVF F + +QK K T+P+ + P+H
Sbjct: 50 KREAHS---SYQLVLHRAFSVFSFTSDNKLLMQKRSAEKITFPNLWTNTCCSHPLH 102
>UniRef50_Q9BXS1 Cluster: Isopentenyl-diphosphate Delta-isomerase 2;
n=30; Euteleostomi|Rep: Isopentenyl-diphosphate
Delta-isomerase 2 - Homo sapiens (Human)
Length = 227
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
KR CH LLHRAFSV LFN + + +Q+ K T+P
Sbjct: 36 KRNCHLNENIEKGLLHRAFSVVLFNTKNRILIQQRSDTKVTFP 78
>UniRef50_UPI00006CCBBC Cluster: isopentenyl-diphosphate
delta-isomerase, type 1 family protein; n=1; Tetrahymena
thermophila SB210|Rep: isopentenyl-diphosphate
delta-isomerase, type 1 family protein - Tetrahymena
thermophila SB210
Length = 249
Score = 37.9 bits (84), Expect = 0.33
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 618 HRAFSVFLFNKRGDMFLQKEIKPKSTYPD 704
HRAFS+FLFN + + LQK + K T+P+
Sbjct: 70 HRAFSIFLFNDKSQLLLQKRSQIKITFPN 98
>UniRef50_UPI00015535B1 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 118
Score = 36.7 bits (81), Expect = 0.77
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 612 LLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LLHRAFSV LFN + ++ +Q+ K T+P
Sbjct: 4 LLHRAFSVVLFNMKNELLVQQRADAKYTFP 33
>UniRef50_O81691 Cluster: Isopentenyl pyrophosphate:dimethylallyl
pyrophosphate isomerase; n=6; Chlorophyta|Rep:
Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase - Chlamydomonas reinhardtii
Length = 307
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 615 LHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LHRAFSVFLF+ G + LQ+ K T+P
Sbjct: 109 LHRAFSVFLFSPDGRLLLQQRAASKVTFP 137
>UniRef50_Q8KZ66 Cluster: Isopentenyl-diphosphate delta-isomerase,
putative; n=1; uncultured proteobacterium|Rep:
Isopentenyl-diphosphate delta-isomerase, putative -
uncultured proteobacterium
Length = 192
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 603 GDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
G+ LHRAFS+FL N G++ LQ+ K +P
Sbjct: 36 GEGQLHRAFSIFLLNDHGEVLLQQRSSLKPLWP 68
>UniRef50_A1ZX54 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=9; Bacteria|Rep: Isopentenyl-diphosphate
delta-isomerase, type 1 - Microscilla marina ATCC 23134
Length = 175
Score = 35.1 bits (77), Expect = 2.3
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPK 689
K E H+ G LLHRAFSVF+FN + ++ LQ+ + K
Sbjct: 21 KLEAHQKG-----LLHRAFSVFVFNDQNELMLQQRAQHK 54
>UniRef50_Q7N0A6 Cluster: Isopentenyl-diphosphate Delta-isomerase 2;
n=3; Proteobacteria|Rep: Isopentenyl-diphosphate
Delta-isomerase 2 - Photorhabdus luminescens subsp.
laumondii
Length = 177
Score = 35.1 bits (77), Expect = 2.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 612 LLHRAFSVFLFNKRGDMFLQKEIKPK 689
+LHRAFS+F+F+ +G++ LQK K
Sbjct: 28 MLHRAFSIFVFDNKGNLLLQKRAATK 53
>UniRef50_O42641 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=5; Dikarya|Rep: Isopentenyl-diphosphate
Delta-isomerase - Phaffia rhodozyma (Yeast)
(Xanthophyllomyces dendrorhous)
Length = 251
Score = 34.7 bits (76), Expect = 3.1
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 573 KRECH---KVGPDGDVLLHRAFSVFLFN-KRGDMFLQKEIKPKSTYP 701
K+ CH + D LLHRAFSVFLF G + LQ+ K T+P
Sbjct: 49 KKTCHLMSNINAPKD-LLHRAFSVFLFRPSDGALLLQRRADEKITFP 94
>UniRef50_Q1JYN2 Cluster: NUDIX hydrolase; n=2;
Desulfuromonadales|Rep: NUDIX hydrolase - Desulfuromonas
acetoxidans DSM 684
Length = 172
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
+ ECH PD L+HR V +FN GD+ LQK + K P
Sbjct: 23 RNECHG-NPD---LVHRVSHVLVFNSSGDLLLQKRSELKDVQP 61
>UniRef50_A6CD79 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 168
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 612 LLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LLHRA +VF+FN +G + LQ K YP
Sbjct: 30 LLHRAANVFVFNSQGKLLLQFRSATKDEYP 59
>UniRef50_A2EXQ9 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1 family protein; n=2; Trichomonas vaginalis
G3|Rep: Isopentenyl-diphosphate delta-isomerase, type 1
family protein - Trichomonas vaginalis G3
Length = 209
Score = 34.3 bits (75), Expect = 4.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 612 LLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LLHRAFS+FLF+ + LQ+ K T+P
Sbjct: 40 LLHRAFSLFLFDSERRLLLQQRSSNKITFP 69
>UniRef50_UPI0000E2279B Cluster: PREDICTED: similar to isopentenyl
pyrophosphate isomerase type 2, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to isopentenyl
pyrophosphate isomerase type 2, partial - Pan
troglodytes
Length = 152
Score = 33.9 bits (74), Expect = 5.4
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 612 LLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
LLHRAFSV LFN + +Q+ K T+P
Sbjct: 31 LLHRAFSVVLFNTENRILIQQRSDTKVTFP 60
>UniRef50_A0CI91 Cluster: Chromosome undetermined scaffold_19, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_19,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 226
Score = 33.9 bits (74), Expect = 5.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 618 HRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
HRAFS+FLF+K + LQ+ K T+P
Sbjct: 50 HRAFSLFLFDKNYKLLLQQRSDAKKTFP 77
>UniRef50_Q6J177 Cluster: Putative isopentenyl diphosphate
isomerase; n=1; Edwardsiella ictaluri|Rep: Putative
isopentenyl diphosphate isomerase - Edwardsiella
ictaluri
Length = 119
Score = 33.5 bits (73), Expect = 7.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 615 LHRAFSVFLFNKRGDMFLQKEIKPK 689
LHRA SV++FN RG++ LQ+ K
Sbjct: 57 LHRALSVYIFNARGELLLQRRAADK 81
>UniRef50_P24550 Cluster: Protein rcp; n=1; Vibrio cholerae|Rep:
Protein rcp - Vibrio cholerae
Length = 205
Score = 33.5 bits (73), Expect = 7.2
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -2
Query: 325 RLDVHNQNEITNIYLIIEYKIGDEDIEINLHDATINRVTNVSSN 194
RL V + ++ N I Y IGD+ + LH+AT ++V VSSN
Sbjct: 28 RLGVSGRRQVRNHMSIDNYVIGDQ---VELHEATSSKVKKVSSN 68
>UniRef50_Q8A0P9 Cluster: Putative NTP pyrophosphohydrolase; n=8;
Bacteroidales|Rep: Putative NTP pyrophosphohydrolase -
Bacteroides thetaiotaomicron
Length = 180
Score = 33.1 bits (72), Expect = 9.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 579 ECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQKEIKPKSTYP 701
ECH G LLH + +FN +GD++LQK + K P
Sbjct: 27 ECHS----GSKLLHPVIHLHVFNSKGDLYLQKRPEWKDIQP 63
>UniRef50_Q5C0D7 Cluster: SJCHGC09251 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09251 protein - Schistosoma
japonicum (Blood fluke)
Length = 204
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 573 KRECHKVGPDGDVLLHRAFSVFLFNK 650
K++CH+V G LLHRAFS+FLF +
Sbjct: 55 KKKCHEV-LSGKSLLHRAFSLFLFRE 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,738,648
Number of Sequences: 1657284
Number of extensions: 14298328
Number of successful extensions: 28966
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 27636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28951
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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