Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D17
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 31 0.82
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 31 0.82
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.9
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.5
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.5
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 29 4.4
Z83246-3|CAB05843.2| 292|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical pr... 28 7.6
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 28 7.6
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 31.5 bits (68), Expect = 0.82
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 158 ENPPAISLRDCK--VTVEENACIGSQCMMPEPAIRILKRPSSSGSGQLNGENRARPVKTL 331
E P + LR K EN S + + + S +LN + + +P T
Sbjct: 69 EEPKRVFLRRPKDGFAASENVIEASPPTSADTEEQPVTNVRSRSHHKLNQKEK-QPAPTY 127
Query: 332 EQRQKEYEQARLRILGEARSPED 400
E+RQ Y+ AR RILG P++
Sbjct: 128 EERQAAYQAARNRILGTEYKPDN 150
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 31.5 bits (68), Expect = 0.82
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 158 ENPPAISLRDCK--VTVEENACIGSQCMMPEPAIRILKRPSSSGSGQLNGENRARPVKTL 331
E P + LR K EN S + + + S +LN + + +P T
Sbjct: 129 EEPKRVFLRRPKDGFAASENVIEASPPTSADTEEQPVTNVRSRSHHKLNQKEK-QPAPTY 187
Query: 332 EQRQKEYEQARLRILGEARSPED 400
E+RQ Y+ AR RILG P++
Sbjct: 188 EERQAAYQAARNRILGTEYKPDN 210
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 31.5 bits (68), Expect = 0.82
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 158 ENPPAISLRDCK--VTVEENACIGSQCMMPEPAIRILKRPSSSGSGQLNGENRARPVKTL 331
E P + LR K EN S + + + S +LN + + +P T
Sbjct: 132 EEPKRVFLRRPKDGFAASENVIEASPPTSADTEEQPVTNVRSRSHHKLNQKEK-QPAPTY 190
Query: 332 EQRQKEYEQARLRILGEARSPED 400
E+RQ Y+ AR RILG P++
Sbjct: 191 EERQAAYQAARNRILGTEYKPDN 213
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = +2
Query: 83 STSYIHKISTFQLEQNIRLNSESPTENPPAISLRDCKVTVEENACIGSQCMMPEPAIRIL 262
S S + T Q + + L S EN + R+ T +++ C + + E L
Sbjct: 1083 SLSSVGNAITEQDKMDPWLERVSNIENN-LVKARETIDTKQDDLCRFADILGAERDCERL 1141
Query: 263 KRPSSSGSGQLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDD-KLTRLQDKL 439
+S QL E KTL +R E E+ + +GE D +D+ K ++ D
Sbjct: 1142 YSWASGKRHQLETEATMCDAKTLVRRMNEVEKMMMSRIGEVDQLRDFLDNLKASKTSDTF 1201
Query: 440 QANNLND 460
Q L +
Sbjct: 1202 QTTELEN 1208
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +2
Query: 266 RPSSSGSGQLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQA 445
R SSGS +LNG + A T E E++ +G R DD + D
Sbjct: 463 RQESSGSAELNGASGAAEAGTPEAGGGEFKAP----VGIPRKFSVKTDDVKPSVND--DG 516
Query: 446 NNLNDSQTNNKKNGENAKSKE 508
++D + KNG+N KS++
Sbjct: 517 EGVDDLHVPDSKNGDNKKSEK 537
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 525 GLPPGATPAGVFPSPPPRGVLVI----RTPRGPDGTKGFLK 635
G+PP P G+ P PPP G L++ R P KG LK
Sbjct: 788 GIPP-PPPLGIIPPPPPPGNLLMNGINRGDISPAANKGVLK 827
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -3
Query: 640 YLFRKPLVPSGPRGVRITSTPRG--GGDGNTPA--GVAPGGSP 524
+ F P P+GP G + P G G DGNTP+ G P G P
Sbjct: 171 FCFDCPPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPP 213
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 525 GLPPGATPAGVFPSPPPRGVLVI----RTPRGPDGTKGFLK 635
G+PP P G+ P PPP G L++ R P KG LK
Sbjct: 788 GIPP-PPPLGIIPPPPPPGNLLMNGINRGDISPAANKGVLK 827
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 272 SSSGSGQLNGENRARPVKTLEQRQKEYEQARLRILGEARS-PEDIIDDKLTRLQDKLQAN 448
SSS SG +G NRA+ +K+ QK ++ R E+ + P+ + D + K+
Sbjct: 725 SSSSSGPASGANRAQMLKS--AFQKSFQTTFQRPTNESSNLPQQVASDPRPEWKKKVDEL 782
Query: 449 N--LNDSQTNNKKNGENAKSKERK 514
N + Q ++ G ++ S K
Sbjct: 783 NAKIAQQQASSASGGSSSSSSSSK 806
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.1 bits (62), Expect = 4.4
Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 2/153 (1%)
Frame = +2
Query: 65 SRTRHLSTSYI-HKISTFQLEQNIRLNSESPTENPPAISLRDCKVTVEENACIGSQCMMP 241
S H + + I H T++LEQN+R++ E + + R +V++EE+
Sbjct: 473 SEHSHSTVTVIEHSEKTYELEQNVRIDLEETLK----LEKRIEEVSIEES-------KKK 521
Query: 242 EPAIRILKRPSSSGSGQLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDK-L 418
+ + + +R + E + + ++ ++++E E+ARL+ E + E+ K L
Sbjct: 522 QEKLELKQREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKEL 581
Query: 419 TRLQDKLQANNLNDSQTNNKKNGENAKSKERKV 517
+ K + + KK + K+RK+
Sbjct: 582 EEERKKKEELEIKRKAEEEKKKKALEEEKKRKI 614
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 389 SPEDIIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKE 508
S E I ++ ++ ++A ND NKKN E+AK K+
Sbjct: 202 SGEKITPEEEEVEEEDVEAKGDNDKNDKNKKNNEDAKKKD 241
>Z83246-3|CAB05843.2| 292|Caenorhabditis elegans Hypothetical
protein ZK795.2 protein.
Length = 292
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 GQLNGENRARPVKTLEQ-RQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDS 463
G L+ N A+ K LEQ +QK++EQ +A PE + +K Q +
Sbjct: 210 GSLSRYNEAKKQKELEQEKQKKHEQKTAEKSEKAVKPEASEKSVKSEKSEKPQKAGEKEP 269
Query: 464 QTNNKKNGENAKSKER 511
++ K E ++ E+
Sbjct: 270 LIDSSKKSEKSEKSEK 285
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +2
Query: 302 ENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQ----- 466
E AR + EQR + A + E + ++D++ R +D+LQA D +
Sbjct: 800 EMEARQAEENEQRIAAEKNALEAKIKEKSNMRKVVDEQNQREKDELQAKLRADQEKSEAR 859
Query: 467 --TNNKKNGENAKSKERKV 517
KK+ +N K KE K+
Sbjct: 860 KIAEKKKDEQNQKEKEAKL 878
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -3
Query: 616 PSGPRGVRITSTPRG-----GGDGNTPAGVAPGGSP 524
P+GP+ ITS P G G GN P G+ P G P
Sbjct: 224 PTGPKNFYITSGPPGPPGPPGPPGN-PGGIGPRGPP 258
>Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical
protein M7.10 protein.
Length = 220
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -3
Query: 739 IFST*NQTNRKQVLTRNILCQSWKLIITVLKYCYLFRKPLVPSGPRGVRITSTPRGGGDG 560
I S +QT + Q L + + + VL++ ++ P GP G+R P+G
Sbjct: 132 ILSNKDQTRKAQHEALIALRKEFPIEFDVLRFISSPKRD--PKGPGGLRRPKGPKGPKGP 189
Query: 559 NTPAGVAPGG 530
P G PGG
Sbjct: 190 GGPHGKPPGG 199
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +2
Query: 296 NGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNN 475
NGE +RP+ T + + +EQ R+ G + + + + + K+ + S +N
Sbjct: 155 NGELHSRPLTTDHKPESVHEQLRIAKAGGETAVKSGVTRVVWKRPQKMSQFMMMTSNSNE 214
Query: 476 KKNGENAKSKE 508
+K+ +N + E
Sbjct: 215 QKHHQNPQIME 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,918,664
Number of Sequences: 27780
Number of extensions: 417874
Number of successful extensions: 1606
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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