Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D13
         (919 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 774 PPPPPXEXGXFFXWXPPXXPPP 839
           PPPPP   G      P   PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 837 GXXXGGGXKXKKXPXPXGGGGG 772
           G   GGG      P P GGGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -3

Query: 914 DXPPXGGGGXXXPPPXXXAGXXGXXGGXXXGG 819
           D P  GGGG     P    G  G  G    GG
Sbjct: 198 DEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 838 GGGXXGGXQXKKXPXSXGGGGG 773
           GGG  GG          GGGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGG 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,415
Number of Sequences: 2352
Number of extensions: 6616
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)