Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D12
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.086
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   3.2  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   3.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.2  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   9.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.086
 Identities = 21/71 (29%), Positives = 23/71 (32%)
 Frame = +2

Query: 563 GPXPXPPPXXPXPRXXGXGXXFPPPXXGXXGXPPNPGXTPEKTFXPRAPQRPXNPKKGPX 742
           GP   PPP  P          F PP       P  P    +  F    P  P N +  P 
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLP-NAQPPPA 584

Query: 743 WXXXFPXGPPP 775
                P GPPP
Sbjct: 585 PPPPPPMGPPP 595



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 20/74 (27%), Positives = 22/74 (29%)
 Frame = -1

Query: 502 PPPPGXGKXKGXXWXXXXXFXXVXRXPXKXKXXPIXPXXXFFPXXLXGGXPXXPXXFXXX 323
           PPPP  G   G        F        +    P+ P    FP     G P  P      
Sbjct: 531 PPPPPPG---GAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP----AGFPNLPNAQPPP 583

Query: 322 GXHXPPPKGGXPXP 281
               PPP G  P P
Sbjct: 584 APPPPPPMGPPPSP 597


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -2

Query: 669 GFGGKPXXPXXGGGNXXPXPKXRGQGXXGGGXGXGPKNQXPXPXGGXGXXXXXKPPXPPP 490
           G  G P     G       P  RG     GG G       P   G  G       P PP 
Sbjct: 93  GVKGDPGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPG 152

Query: 489 XPG 481
            PG
Sbjct: 153 YPG 155


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 44  RFFYAKAIRREVIFNNLFLFVCNVSKCQTL--IIRCKINIFYRI 169
           RFFY+K+  R  +       +C  SK +     IR  IN+F+ I
Sbjct: 108 RFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHHI 151


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 44  RFFYAKAIRREVIFNNLFLFVCNVSKCQTL--IIRCKINIFYRI 169
           RFFY+K+  R  +       +C  SK +     IR  IN+F+ I
Sbjct: 108 RFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHHI 151


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -2

Query: 687 FSGVXPGFGGKPXXPXXGGGNXXPXPKXRGQGXXGGGXGXG 565
           + G   G+GG       G G      + RG    GGG G G
Sbjct: 57  YGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGG 97


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 636 GGGNXXPXPKXRGQGXXGGGXGXG 565
           GGG+  P  +  G+G  G G G G
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGG 562


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 71  YVSLWRKKILRNSTIVRSV 15
           Y+S W ++IL  +T ++SV
Sbjct: 215 YISAWNQQILTTTTALQSV 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,653
Number of Sequences: 2352
Number of extensions: 13439
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)