Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D10
(871 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 194 2e-50
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 175 7e-45
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 159 5e-40
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 142 8e-35
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 130 3e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 102 8e-23
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 75 1e-14
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 44 3e-05
SPBC83.06c |||mitochondrial ribosomal protein subunit L36|Schizo... 28 2.0
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 2.6
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 27 2.6
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 3.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 194 bits (472), Expect = 2e-50
Identities = 87/115 (75%), Positives = 93/115 (80%)
Frame = +2
Query: 383 KLLRTLEALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 562
K ALCTGEKG+GY GS+FHR+IP FM QGGDFT NGTGGKSIYG F DENF L
Sbjct: 29 KTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFAL 88
Query: 563 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKL 727
KH PG+LSMANAGPNTNGSQFFITTV TPWLD KHVVFG V EGMDVV+K+E L
Sbjct: 89 KHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESL 143
Score = 49.2 bits (112), Expect = 8e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1
Query: 310 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRS 405
+FDV A+G+PLGRIV KL D VPKTA NFR+
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRA 36
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 175 bits (426), Expect = 7e-45
Identities = 78/114 (68%), Positives = 89/114 (78%)
Frame = +2
Query: 383 KLLRTLEALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 562
K AL TGEKGFGY+GS FHR+IP+FM QGGD T +GTGGKSIYG F DENFKL
Sbjct: 54 KTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKL 113
Query: 563 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK 724
H PG+LSMANAGP++NGSQFFITTV TPWLD HVVFG V+ G D+V+K+ K
Sbjct: 114 SHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISK 167
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +1
Query: 307 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRSSVYW*KRFWVQGFI 447
VYFD+ E LGR+ I L VPKTAENFR+ K F +G I
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSI 75
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 159 bits (386), Expect = 5e-40
Identities = 78/140 (55%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
Frame = +2
Query: 383 KLLRTLEALCTGEKGFG----YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE 550
K ++ +LC G + G YKGS FHR+I +FM QGGDFT NGTGG+SIYG F DE
Sbjct: 30 KTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDE 89
Query: 551 NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLX 730
NF+LKH P +LSMANAGPNTNGSQFFITTVPTP LD KHVVFG V++G V+ +E L
Sbjct: 90 NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLE 149
Query: 731 XXXXXXXXXXXISDSGELDK 790
I + G K
Sbjct: 150 TKNDDPVVPVVIEECGTCTK 169
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 310 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRS 405
YF ++ DG+ I +L + VPKT +NF S
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFAS 37
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 142 bits (343), Expect = 8e-35
Identities = 67/110 (60%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +2
Query: 395 TLEALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTFSDENFKLKHT 571
T E L +K GYK S+FHRII FM QGGDF + +GTG +I+ RTF DENF LKH
Sbjct: 42 TGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHD 101
Query: 572 GPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKME 721
PG+LSMANAG ++NG QFFITTVP +LD KHVVFG V+EG D+V+++E
Sbjct: 102 RPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIE 151
Score = 42.7 bits (96), Expect = 7e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 286 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFR 402
ST+P V+ D+ DG LGRI I+L + VPKTAENFR
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFR 38
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 130 bits (314), Expect = 3e-31
Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Frame = +2
Query: 392 RTLEALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKH 568
+T + T K Y G FHR+IPDF+ QGGD T G GG SIYG F DE + L H
Sbjct: 24 KTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHH 82
Query: 569 TGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKM 718
TG GILSMANAGPNTN SQFFIT PTPWLD KH +FG VV G+ V ++M
Sbjct: 83 TGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 340 LGRIVIKLNTDEVPKTAENF 399
LG+I+I+L T+ PKT +NF
Sbjct: 10 LGKILIELYTEHAPKTCQNF 29
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (273), Expect = 2e-26
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +2
Query: 419 EKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMA 595
E G+ Y + FHRII +FM QGGD +GTGG+SI+ + F DE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 596 NAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK 724
N+GPNTNGSQFFITT TPWLD KH +F G+DVV ++E+
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ 587
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 102 bits (244), Expect = 8e-23
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +2
Query: 434 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPN 610
Y+ + FHR I FM QGGD + G GG+SI+G+ F DE LKH GI+SMAN G N
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 611 TNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKL 727
TNGSQFFI P LD KH +FG VV G++V+ +EK+
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKV 409
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 74.9 bits (176), Expect = 1e-14
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +2
Query: 383 KLLRTLEALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENF-K 559
K R LC +G+ Y G+ HR++P+F+ QGGD T G GG+SIYG F+ E +
Sbjct: 35 KACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPR 90
Query: 560 LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVV 691
L+ G++ MA N SQFFIT PTP + K +FG VV
Sbjct: 91 LRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 44.0 bits (99), Expect = 3e-05
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Frame = +2
Query: 434 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG------RTFSDE-NFKLKHTGPGILSM 592
Y F+ I ++ CQ GD G GG+ ++ R F E N L H G++SM
Sbjct: 37 YNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSM 96
Query: 593 ANAGPNTN-------GSQFFITTVPT-PWLDRKHVVFGSVVEGMDVVQKM 718
+ A ++ GSQF IT LD ++ ++G V EG D + K+
Sbjct: 97 STATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKI 146
>SPBC83.06c |||mitochondrial ribosomal protein subunit
L36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 59
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 147 SKVHIVKYTGRIYLVCDENPNHDT 218
S + V+ GR+Y++C ++P H T
Sbjct: 33 SSCYFVRRKGRLYVLCKKHPRHKT 56
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1
Query: 352 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 257
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = -2
Query: 462 IIL*NDEPLYPKPFSP-VHRASKVLSSFRYFIRVQFYDYTSQWLSVSSYIEINL 304
++L D L P +P + RA L++ +YF+++ + ++ + SSY++I+L
Sbjct: 852 VLLMADGELSPFKNTPKISRAYLRLTASKYFLKLCSIPFYAEHIDFSSYVQISL 905
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 704 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 606
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,371,236
Number of Sequences: 5004
Number of extensions: 70547
Number of successful extensions: 210
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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