Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D09
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 56 9e-09
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 4e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 2e-06
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 47 3e-06
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 47 4e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 46 6e-06
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 42 9e-05
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 42 1e-04
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 42 1e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 42 2e-04
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 41 3e-04
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 40 6e-04
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 40 6e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 39 8e-04
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 37 0.003
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 34 0.032
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 30 0.51
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 29 0.68
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 29 0.90
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 29 0.90
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 29 1.2
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 28 1.6
SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces ... 28 2.1
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 2.1
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 26 8.4
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 55.6 bits (128), Expect = 9e-09
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Frame = +1
Query: 106 KMSTKVAVVTGANKGIGFAIVR-GLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYH 282
K + ++TG++KG+G+A+V+ GL + +N V SR + I +E K L
Sbjct: 2 KSTFSTVLITGSSKGLGYALVKVGLAQGYN--VIACSRAPDT--ITIEHSKLLKL----- 52
Query: 283 QLDITNKKSVE-SFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLT 459
+LD+T+ KSVE +F+D K ++ +DI+INNA + + + VNF+ +
Sbjct: 53 KLDVTDVKSVETAFKD-AKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVA 111
Query: 460 STCEILFPIVK---NGGRVINVSSSAGH 534
+ +++ GGR++ +SS AG+
Sbjct: 112 YITKEALNLMRESGKGGRILQISSVAGY 139
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 50.0 bits (114), Expect = 4e-07
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Frame = +1
Query: 106 KMSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEER-GKIAVETLKNEGLNPSYH 282
++ K ++TGA+ GIG + + K + L +R +IA E ++
Sbjct: 3 RLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPL 62
Query: 283 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLT 459
+LD+++ KS+ + + ++ ID+LINNA +A + + + T+ N +
Sbjct: 63 KLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMM 122
Query: 460 STCEILFPIV--KNGGRVINVSSSAGHLSRI 546
+ + PI KN G ++NV S AG S +
Sbjct: 123 AMTRAVLPIFYSKNKGDILNVGSIAGRESYV 153
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 47.6 bits (108), Expect = 2e-06
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +1
Query: 109 MSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPS--YH 282
++ KVA+VTG++ GIG+ L ++ VYL R+EE+ + ++ + +E + +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARK-GAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 283 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 462
+LD+ + +SV + K E + IL+NNA I E E + N+ S
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGI--MNPPFELTKDGYELQIQTNYLSHYL 156
Query: 463 TCEILFPIVK 492
E+L P ++
Sbjct: 157 FTELLLPTLR 166
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 47.2 bits (107), Expect = 3e-06
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +1
Query: 112 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 291
+ KV + G N+GIG ++V+ L R TV+ ++R E E K+ N +LD
Sbjct: 4 TNKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELD 62
Query: 292 ITNKKSVESFRDYIKTKYEGIDILINNAAI 381
+T+++S + +GID+L N+ I
Sbjct: 63 VTSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 46.8 bits (106), Expect = 4e-06
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNGTV--YLTSRDEERG-KIAVETLKNEGLNPSYHQL 288
K VV GA KGIGF+I + + YLT+ E+ K+A ET G+ ++
Sbjct: 22 KNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEET----GVQVHTLKI 77
Query: 289 DITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTC 468
DI+ +VE+ + I+ ++ I +++ NA + F+++ + + E+ + +N S+
Sbjct: 78 DISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVYRVA 137
Query: 469 EILFPIVKNGG 501
+ I K G
Sbjct: 138 YYMGKIFKKQG 148
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 46.4 bits (105), Expect = 6e-06
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Frame = +1
Query: 106 KMSTKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEER--GKIAVETLKNEGLNPSY 279
K++ K ++TG + GIG A + R + ++ EER ++ + ++ EG N
Sbjct: 39 KLAEKKTLLTGGDSGIGKAAAV-MFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWI 97
Query: 280 HQLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQ---TLYVNFF 450
+ + + D+ K ID+L+NN IA++Q A + EQ T N F
Sbjct: 98 WEGKLDKSDNCRDLVDFALKKLGWIDVLVNN--IAYQQVAQSIEDIDDEQWDLTFKTNIF 155
Query: 451 SLTSTCEILFPIVKNGGRVINVSSSAGHLSR 543
S + +K+G ++N SS ++ R
Sbjct: 156 SFFWVTKAAISHMKSGSSIVNCSSINAYVGR 186
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 42.3 bits (95), Expect = 9e-05
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = +1
Query: 112 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 291
+ K+ + G N+GIG ++V+ L R V+ ++R E E K+ N +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHS-NVHIIKLD 62
Query: 292 ITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTC 468
I++ +S + +D+L N+ I N + Y N
Sbjct: 63 ISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVY 122
Query: 469 EILFPIVKNGGRVINVSSSA 528
+ +P+VK G I V +S+
Sbjct: 123 QAFYPLVKKGESKIIVFTSS 142
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 41.9 bits (94), Expect = 1e-04
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNG---------TVYLTSRDEERGKIAVETLK----N 258
K A++TG+N G+GF I L + + TV LT R E+ + A LK +
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 259 EGLNPSYHQLDITNKKSVESFRDYIKTKYEGIDILINNA 375
+ Y LD++N SVE+ I T++ +D + NA
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNA 103
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 41.9 bits (94), Expect = 1e-04
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 297
K AVV G +GIG AI + ++ K A E + G+ + D+T
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEA-GANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVT 80
Query: 298 NKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTCEIL 477
K VE I+ ++ IDI++ N I ++A + + + VN + +
Sbjct: 81 IPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNA 140
Query: 478 FPIV-KNG-GRVINVSSSAGHLSRIPSE 555
PI K G G ++ +S +G + +P +
Sbjct: 141 GPIFQKQGHGSLVATASMSGVVVNVPQQ 168
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 297
K ++TG + GIGF+I + + L R+++ + A E G+ + I
Sbjct: 10 KTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPIE 69
Query: 298 NKKSV-ESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQA-EQTLYVNFFSLTSTCE 471
N+ +V E+ ++ +D++I NA IA + E + + +N T +
Sbjct: 70 NRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQ 129
Query: 472 IL-FPIVKNG-GRVINVSSSAGHLSRIPSE 555
K G G +I +S +GH++ P +
Sbjct: 130 AAGHHFKKQGKGSLIFTASMSGHIANWPQQ 159
Score = 29.1 bits (62), Expect = 0.90
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 750 KVNAVHPGYLDTDMT 794
+VN+V PGY+DTD+T
Sbjct: 186 RVNSVSPGYIDTDLT 200
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 40.7 bits (91), Expect = 3e-04
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Frame = +1
Query: 112 STKVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLD 291
+ K+ + G N+GIG ++V+ L R GTV S + ++ N +LD
Sbjct: 4 TNKIYFIAGGNRGIGLSLVKELSNR-KGTVVFASARKPGAATKLQEWSKSHSNVHIIKLD 62
Query: 292 ITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTC 468
+++ +S + + +D+L N+A+ + Y N
Sbjct: 63 VSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVY 122
Query: 469 EILFPIVKNGGRVINVSSSA 528
+ +P++K G I V +S+
Sbjct: 123 QAFYPLIKKGRSKIIVFTSS 142
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 39.5 bits (88), Expect = 6e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 283 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 462
QLD+ N S++ + + + ID+L+NNA + Q N F
Sbjct: 20 QLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALE 79
Query: 463 TCEILFPIVK--NGGRVINVSSSAGHLS 540
+ + PI + + G +INVSS G ++
Sbjct: 80 VIKAITPIFRSQHNGMIINVSSIGGKMT 107
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 39.5 bits (88), Expect = 6e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 283 QLDITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTS 462
QLD+ N S++ + + + ID+L+NNA + Q N F
Sbjct: 20 QLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALE 79
Query: 463 TCEILFPIVK--NGGRVINVSSSAGHLS 540
+ + PI + + G +INVSS G ++
Sbjct: 80 VIKAITPIFRSQHNGMIINVSSIGGKMT 107
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 39.1 bits (87), Expect = 8e-04
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 297
KV ++TG++KGIG A L K+ S E +ETL + + H
Sbjct: 7 KVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPE-----LETLLIQNPDSFVHVKGDV 61
Query: 298 NKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLY-VNFFSLTSTCEI 474
+ S IK K+ +D +I NA + + + L+ +NFFS+ T +
Sbjct: 62 TEVGKASIETAIK-KFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKY 120
Query: 475 LFP-IVKNGGRVINVSSSA 528
P + K G ++ VSS A
Sbjct: 121 AIPHLRKTKGTIVIVSSGA 139
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = +1
Query: 121 VAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDITN 300
V V+ G N+GIG ++V+ L + TV+ ++R + K N +LD+T+
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDWSKTHS-NVHIIKLDVTS 66
Query: 301 KKSVESFRDYIKTKYEGIDILINNAAIA 384
+S + ++ + ID+L N+ I+
Sbjct: 67 LRSAKDAAMQVEKVVKCIDVLWVNSGIS 94
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.9 bits (74), Expect = 0.032
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +1
Query: 118 KVAVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDIT 297
+V ++TGA GIG + LCK F D G V+ K + + Q D++
Sbjct: 6 RVVLITGAAGGIG----KVLCKMFTEL-----GDRVAGIDIVDPSKVQDAALAL-QADVS 55
Query: 298 NKKSVESFRDYIKTKYEGIDILINNAAIA----FKQNATEPVAVQAEQTLYVNFFSLTST 465
+E+ + + ID+LINNA +A F+Q + E L N+ +
Sbjct: 56 KADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYV 115
Query: 466 CEILFPIVKNGGRVINVSSSAGHL 537
+ K GG ++N+ S GH+
Sbjct: 116 IPHMAKQGK-GGSIVNIGSVNGHI 138
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 732 LSDRDIKVNAVHPGYLDTDMTS 797
++ + I+VNA+ PGY+DT M S
Sbjct: 169 VASKGIRVNAISPGYVDTPMLS 190
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 29.5 bits (63), Expect = 0.68
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 289 DITNKKSVESFRDYIKTKYEGIDILINNAAIAFKQNATEPVAVQAEQTLYVNFFSLTSTC 468
+IT K VE +K LIN AAIA K + + ++ N +
Sbjct: 86 NITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAIT 145
Query: 469 EILFPIVKN--GGRVINVSSSAGHLS 540
LFP++ V+N++SS + S
Sbjct: 146 SALFPLLLQDPNPHVVNIASSLAYFS 171
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 223 ERGKIAVETLKNEGLNP-SYHQLDITNKKSVESFRDYIKTKYE 348
E KIA+ T E P + H+LDIT+ E+ + Y K K++
Sbjct: 246 ENAKIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQ 288
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 29.1 bits (62), Expect = 0.90
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -3
Query: 783 YLNSLDVLHSL*YLCQKAILXLNLGKSSDSYFRHSI*RITPLFSLNTLLRIIHILLHEGN 604
+++SLD H + + +N DSY+ H+ + +N+LLR +LLH N
Sbjct: 999 FIHSLDATHMFMTCLKCSEQNINFAAVHDSYWTHAC----DVDQMNSLLREAFVLLHSNN 1054
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 127 VVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLK----NEGLNPSYHQLDI 294
+VTG ++G+G AI + L R V + +R + + AV L +E S+ +D+
Sbjct: 26 LVTGGSQGLGKAIAKELVLR-GANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 295 TNKKSVES 318
T+ +SV S
Sbjct: 85 TSYESVHS 92
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 97 YEKKMSTKVAVVTGANKGIGFAIVRGL 177
+E+KM+ V +VTG + GIG +V L
Sbjct: 69 WERKMNGMVVMVTGGSSGIGQVVVEKL 95
>SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 211 SRDEERGKIAVETLKNEGLNPSYHQLDITNKKSVESFRDY-IKTKYEGI 354
+R E++ + A+ + E L+ YH D+T +KS++ + Y + +K++GI
Sbjct: 93 ARQEDKPRSAIIS---ELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGI 138
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
Frame = +1
Query: 124 AVVTGANKGIGFAIVRGLCKRFNGTVYLTSRDEERGKIAVETLKNEGLNPSYHQLDITNK 303
AVVTGA GIG L V ++ E+ +A E + +D T K
Sbjct: 60 AVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAIDYT-K 118
Query: 304 KSVESF----RDYIKTKYEGIDILINNAAIA--FKQNATEPVAVQAEQTLYVNFFSLTST 465
+ E+F +D + T I +LINN + + E + + +++N F T
Sbjct: 119 TTAETFEKLHQDLVGTP---ITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHT 175
Query: 466 CEILFPIV 489
+ + I+
Sbjct: 176 TKAVLSIM 183
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 8.4
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Frame = +1
Query: 217 DEERGKIAVETLKNEGLNPSYHQLDITNKKSVESFRDYIKTKY---EGIDILINNAAIAF 387
D E G A N +PS L I NK+ V S + GI+ L+ ++ I
Sbjct: 83 DSESGLTASVACCNCCRHPSEACLYILNKRKVMSQHGLVPPAMLVGNGIEKLLLHSNIKL 142
Query: 388 KQNA---TE---PVAVQAEQTLYVNFFSLTSTCEILFPIVKNGGRVINVSSSAGHL 537
+ TE ++ ++ LY N +L+S I V GR+ VSSS G L
Sbjct: 143 VPESHLITERSMKTQIKWKEILYQNPINLSSQDTIGVICVDKNGRIAVVSSSGGLL 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,426,575
Number of Sequences: 5004
Number of extensions: 71473
Number of successful extensions: 227
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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