Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D08
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 29 0.69
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 28 2.1
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 28 2.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 2.1
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 27 4.8
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.4
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 6.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 6.4
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 26 8.5
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 8.5
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 26 8.5
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 8.5
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -1
Query: 489 SATSRPIHQLLSYFSLMCRKSRTSKEMAVP 400
++TSRP+H++ SY SL R+S T K +P
Sbjct: 21 TSTSRPLHEIPSYQSL-ARRSSTWKRANIP 49
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 27.9 bits (59), Expect = 2.1
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 248 LSLDDDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVHGTAISFDVR 427
++LDD KE+L + D P+ VR AY A + + I +V
Sbjct: 327 VNLDDKKESLLKYYATHPTITPD---GFPIFAYVRALYAYKATLPSE-------IDLNVD 376
Query: 428 DFLHIKEKYDNNWWIGRLVAEN-SDIGFIPS 517
D L + + + WW G +V+ IG PS
Sbjct: 377 DTLVVLNRQKDGWWKGLVVSPTVGRIGLFPS 407
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 188 YNKLFTQGSAESNCSQPSSELSLDDDKEAL--RREKEAQALSQLDKARS 328
Y KLFT+ + E S E +DD L + E+E ++L++L K S
Sbjct: 19 YYKLFTRENIEKVISNMEKEAKHEDDANTLQPKTEEEIESLAKLFKKPS 67
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 212 SAESNCSQPSSELSLDDDKEALRREKEAQALSQLDKARSK 331
S+ S+C S E S DD+ L EK+A + +Q SK
Sbjct: 265 SSSSSCISDSEESSSDDELNELSNEKKANSPTQNVDTSSK 304
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 410 ISFDVRDFLHIKEKYDNNWWIGRLV-AENSDIGFIPS 517
ISF D L + ++ WW G ++ NS G PS
Sbjct: 885 ISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPS 921
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 RNMMSYSQAHGYNKLFTQGSAESNCS-QPSSELSLDDD 265
RN++SY +H Y L SA+ N + +P + L D D
Sbjct: 265 RNLLSYYCSHNYQHLIENESADINIAHRPLTTLFSDTD 302
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 410 ISFDVRDFLHIKEKYDNNWWIGRLVAENS-DIGFIPS 517
ISF D + + + Y++ WW G +V E+ + G PS
Sbjct: 626 ISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPS 662
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 380 DDDSPVHGTAISFDVRDFLHIKEKYDNNW 466
D +P A+ D++ FLH+ K NW
Sbjct: 528 DGATPSEIVALEQDIKFFLHVLTKISKNW 556
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 410 ISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPS 517
+ F D + D WWIGR + N+ G PS
Sbjct: 25 LKFTEGDLIECLSIGDGKWWIGRHINTNTQ-GIFPS 59
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 410 ISFDVRDFLHIKEKYDNN--WWIGRL 481
+SF D + + + DN WWIGRL
Sbjct: 426 LSFHAGDRIEVVSRTDNQNEWWIGRL 451
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 507 NPMSEFSATSRPIHQLLSYFSLMCRKSRTSKEMAVPCTGESSSI 376
NP S A S + L +L+ S SK + V CTG+S ++
Sbjct: 189 NPESLQVAASLLLPALSGSCALLTSYSAKSKSLQVACTGDSRAV 232
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 170 YSQAHGYNKLFTQGSAESNCSQPSSELSLDDDKEAL 277
Y + + K++ GS NC + S ++ LD+ EAL
Sbjct: 465 YLEIKNFQKIYFTGS--ENCQKLSKQIPLDECNEAL 498
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +2
Query: 329 KPVAFAVRTNVAYDAKIDDDSPVHGTAISFDVRDFLHIKEKY 454
KP ++T + Y +++ VHG+ + D +H+K+ +
Sbjct: 245 KPTLINLKTTIGYGSELQGTHSVHGSPLK--PEDCVHVKKLF 284
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 8.5
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Frame = +2
Query: 125 SAASHQPSSCRNMMSYSQAHGYNKLFTQGSAESN-------CSQPSSELSLDDDKEALRR 283
S+ + SS S A G+N +FT S S+ S SS+ S + + A
Sbjct: 722 SSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTS 781
Query: 284 EKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVHGTAI 412
+ + + S V+ N +Y + I +S T+I
Sbjct: 782 SSSSATPTITQSSISTSVSSQSSMNSSYSSPISSNSVTSSTSI 824
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,918,958
Number of Sequences: 5004
Number of extensions: 26280
Number of successful extensions: 113
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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