Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D08
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726...    33   0.24 
04_01_0037 + 444239-444667,444817-444825                               29   6.7  
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140...    28   8.9  

>01_05_0344 +
           21172101-21172233,21172332-21172402,21172492-21172653,
           21172995-21173100,21174242-21174439,21174565-21174631,
           21174868-21175051,21175145-21175324,21175408-21175587,
           21176472-21176627,21177487-21178067,21178535-21178640,
           21179152-21179331,21179620-21179892
          Length = 858

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +2

Query: 203 TQGSAESNCS-QPSSELSLDDDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKI 379
           +QGSA  +   +P  E  + DD E L   +++  +   +KA  KP+A  +R  VAYD   
Sbjct: 788 SQGSALIDEDIEPHGEKEVSDDPERLIDAEKSPHVPDNNKAERKPLADRIRVLVAYDDLF 847

Query: 380 DDDSPVHGTA 409
           ++     G A
Sbjct: 848 EEGEIHEGDA 857


>04_01_0037 + 444239-444667,444817-444825
          Length = 145

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 655 VGXVTSIERRVHXGWGECYLGSGGWXASXXRPLAASP 545
           VG V ++ RRV     E YL  G W A    PLA  P
Sbjct: 110 VGLVVAVLRRVAAA--EAYLRRGRWAADGDYPLATKP 144


>02_05_0699 +
           31013176-31013345,31013749-31013872,31013950-31014032,
           31014106-31014217,31014297-31014401,31014809-31014859,
           31015893-31015979,31016325-31016402,31016477-31016530,
           31016608-31016892
          Length = 382

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +2

Query: 191 NKLFTQGSAESNCSQPSSELSLDDDKEALRREKEAQALSQLDKARS 328
           N    Q S+ SN  + SS+ S  DD + +++EK++++ S ++ +RS
Sbjct: 305 NNTTLQRSSSSNKGKTSSKESKSDDDQTVKKEKKSKSKS-MEGSRS 349


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,950,599
Number of Sequences: 37544
Number of extensions: 233019
Number of successful extensions: 721
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)