Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D08
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 149 3e-36
AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium chann... 79 4e-15
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 42 6e-04
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 42 6e-04
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 42 6e-04
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 37 0.017
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 37 0.017
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 37 0.017
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 32 0.49
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 31 0.86
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 31 1.5
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 30 2.0
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 30 2.0
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 30 2.0
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 29 6.0
Z81071-9|CAI79242.1| 177|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel,
beta subunit protein1 protein.
Length = 526
Score = 149 bits (361), Expect = 3e-36
Identities = 71/110 (64%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Frame = +2
Query: 206 QGSAESNCSQPSSELSLD-DDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKID 382
+GS +SN S EL L+ ++E LRR+ E QA QL++A+ KPVAFAV TNV YD +D
Sbjct: 6 RGSGDSNFSH-HDELELEAGNRETLRRDAERQAALQLERAKYKPVAFAVCTNVEYDGSVD 64
Query: 383 DDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPSPVKLE 532
DDSPVHG A+SF V+DFLHIKEKY+N+WWIGRLV E D+GFIPSPVKLE
Sbjct: 65 DDSPVHGCAVSFKVKDFLHIKEKYNNDWWIGRLVKEGHDLGFIPSPVKLE 114
>AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium channel,
beta subunit protein2 protein.
Length = 357
Score = 79.0 bits (186), Expect = 4e-15
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Frame = +2
Query: 212 SAESNCSQPSSELSLDDDKEALRRE--KEAQALSQLDKARSKPVAFAVRTNVAYDAKIDD 385
S + + ++P +L + ++ R+ + AL L ++ K VAFAV+ YD +D+
Sbjct: 15 SYKLSSNEPGIKLMHNSQRDDQHRKDVEHFAALRALQHSKRKHVAFAVQAMRDYDGSLDE 74
Query: 386 DSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPSPVKL 529
SP+ ISF+ DF+HI K++++WWIGR+V +S+ GF+P+ +L
Sbjct: 75 KSPLKDHTISFNTNDFIHIHTKFNSDWWIGRIVRSHSEFGFVPTARRL 122
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVA--FAVRTNVAYDAKIDDDSPVHGTAISFDV 424
S++ +E LR + + RS P A VR Y+ DD P I F
Sbjct: 263 SVESLQEMLRDARGQVTFKIIPSYRSAPPACEIFVRAQFDYEPSQDDLIPCPQAGIPFKT 322
Query: 425 RDFLHIKEKYDNNWWIGRLVAENSDIG 505
D L + K D+NWW R V+ IG
Sbjct: 323 GDILQVISKDDHNWWQARFVSSFPSIG 349
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVA--FAVRTNVAYDAKIDDDSPVHGTAISFDV 424
S++ +E LR + + RS P A VR Y+ DD P I F
Sbjct: 604 SVESLQEMLRDARGQVTFKIIPSYRSAPPACEIFVRAQFDYEPSQDDLIPCPQAGIPFKT 663
Query: 425 RDFLHIKEKYDNNWWIGRLVAENSDIG 505
D L + K D+NWW R V+ IG
Sbjct: 664 GDILQVISKDDHNWWQARFVSSFPSIG 690
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVA--FAVRTNVAYDAKIDDDSPVHGTAISFDV 424
S++ +E LR + + RS P A VR Y+ DD P I F
Sbjct: 263 SVESLQEMLRDARGQVTFKIIPSYRSAPPACEIFVRAQFDYEPSQDDLIPCPQAGIPFKT 322
Query: 425 RDFLHIKEKYDNNWWIGRLVAENSDIG 505
D L + K D+NWW R V+ IG
Sbjct: 323 GDILQVISKDDHNWWQARFVSSFPSIG 349
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVA--FAVRTNVAYDAKIDDDSPVHGTAISFDV 424
S++ +E LR + + RS P A VR Y+ DD P I F
Sbjct: 604 SVESLQEMLRDARGQVTFKIIPSYRSAPPACEIFVRAQFDYEPSQDDLIPCPQAGIPFKT 663
Query: 425 RDFLHIKEKYDNNWWIGRLVAENSDIG 505
D L + K D+NWW R V+ IG
Sbjct: 664 GDILQVISKDDHNWWQARFVSSFPSIG 690
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 347 VRTNVAYDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSD---IGFIPS 517
VR YD ++ H ++ F+ D LHI D+ WW R V EN + G IPS
Sbjct: 624 VRALFDYDPSRENSVAPH-RSMGFNYGDILHIINSSDDEWWTARKVHENGEETAEGVIPS 682
Query: 518 PVKLE 532
++E
Sbjct: 683 KKRVE 687
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 347 VRTNVAYDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSD---IGFIPS 517
VR YD ++ H ++ F+ D LHI D+ WW R V EN + G IPS
Sbjct: 624 VRALFDYDPSRENSVAPH-RSMGFNYGDILHIINSSDDEWWTARKVHENGEETAEGVIPS 682
Query: 518 PVKLE 532
++E
Sbjct: 683 KKRVE 687
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like
protein DLG-1 protein.
Length = 967
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 347 VRTNVAYDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSD---IGFIPS 517
VR YD ++ H ++ F+ D LHI D+ WW R V EN + G IPS
Sbjct: 624 VRALFDYDPSRENSVAPH-RSMGFNYGDILHIINSSDDEWWTARKVHENGEETAEGVIPS 682
Query: 518 PVKLE 532
++E
Sbjct: 683 KKRVE 687
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.49
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 140 QPSSCRNMMSYSQAHGYNKLFTQGSAESNCSQPSSELSLDDDKEALRREK--EAQALSQL 313
Q ++ + H +K + S+ S+ S SSE S +D+K R+K + Q L ++
Sbjct: 166 QKDDKEKLLETLRLHRKSKKKQESSSSSSSSSSSSESSSEDEKHRKDRKKKEKKQKLKEM 225
Query: 314 DKARSKPVAFAVRTNVAYDAKIDDDSPVHGT 406
+K R K + R +A K+ + P +
Sbjct: 226 EKRREK-LRQKERELLAVSDKVKKEEPAESS 255
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 365 YDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAE---NSDIGFIPS 517
YD + D P A+ F D LH+ D+NWW E +S G IPS
Sbjct: 348 YDPEDDVYVPCKELAMKFQRGDILHVLNTKDDNWWQAYRDGEDIQHSLAGLIPS 401
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 365 YDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPS 517
YDA+ DDD +SF D L I +WW R A G+IPS
Sbjct: 68 YDARTDDD-------LSFKKDDILEILNDTQGDWWFARHKA-TGRTGYIPS 110
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVH 400
S ++ EA E E ++Q+ + + KP A N AYDA D+ P+H
Sbjct: 225 SSEEIVEASIHEDEPIVMAQIPEEKPKPKAIPAFDN-AYDADFDNSPPLH 273
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 251 SLDDDKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVH 400
S ++ EA E E ++Q+ + + KP A N AYDA D+ P+H
Sbjct: 225 SSEEIVEASIHEDEPIVMAQIPEEKPKPKAIPAFDN-AYDADFDNSPPLH 273
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 404 TAISFDVRDFLHIKEKYDNNWWIGRLVAENSDIGFIPS 517
T ISFD D + ++ D+ WW GR A + +G P+
Sbjct: 602 TEISFDPDDIITDIDQVDSGWWKGR--APSGRVGLFPA 637
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 428 DFLHIKEKYDNNWWIGRLVAENSDIGFIPS 517
DF+++ EK + WW G A N +G+ PS
Sbjct: 27 DFVYVVEKSTDGWWKGE--APNGGVGWFPS 54
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 428 DFLHIKEKYDNNWWIGRLVAENSDIGFIPS 517
DF+++ EK + WW G A N +G+ PS
Sbjct: 139 DFVYVVEKSTDGWWKGE--APNGGVGWFPS 166
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 365 YDAKIDDDSPVHGTAISFDVRDFLHIKEKYDNNWWIGRLV 484
YD D P AISF D L I ++ D WW R +
Sbjct: 231 YDPWQDKRHPCPEAAISFRGGDILEILDEKDQYWWQTRKI 270
>Z81071-9|CAI79242.1| 177|Caenorhabditis elegans Hypothetical
protein F28F8.9 protein.
Length = 177
Score = 28.3 bits (60), Expect = 8.0
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +2
Query: 263 DKEALRREKEAQALSQLDKARSKPVAFAVRTNVAYDAKIDDDSPVHGTAISFDVRDFLHI 442
D++AL R + L + AR +A R + +I SPV T V+ L I
Sbjct: 88 DEKALERLTDLAKLRIITSARQMAIAQRRRKD---GFEIPFKSPVEWTLKLQGVQKVLDI 144
Query: 443 KEKYDNNWWIG------RLVAENSDI 502
KE YD +W +L+ EN D+
Sbjct: 145 KEWYDVTYWTRFRALKMQLIDENGDL 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,209,020
Number of Sequences: 27780
Number of extensions: 163879
Number of successful extensions: 531
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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