Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D07
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 243 3e-65
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 199 5e-52
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 194 2e-50
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 186 3e-48
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 175 9e-45
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 149 5e-37
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 85 1e-17
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 85 2e-17
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 81 2e-16
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 8e-15
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 74 3e-14
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 73 4e-14
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 71 2e-13
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 71 3e-13
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 69 9e-13
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 62 1e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 60 3e-10
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 58 2e-09
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 44 3e-05
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.5
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 4.7
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 26 6.2
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 8.2
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 243 bits (594), Expect = 3e-65
Identities = 108/189 (57%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQED 427
IKCVVVGDG VGKTC+LISYTT+ FP +YVPTVFDNY+ +++ +LGL+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 428 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDR 607
YDRLRPLSYPQTDVFL+CFSVTSP+S+ENV KW+PE+ HHCP P ++VGT+IDLRDD
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 608 ETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGV-RRGCTCSVKTGXXK 784
L+ Q PL EQG++LA ++ A KY+ECSAL ++ L V ++
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPH 183
Query: 785 RXQRKCLIM 811
+ + KCL++
Sbjct: 184 KKKSKCLVL 192
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 199 bits (485), Expect = 5e-52
Identities = 91/164 (55%), Positives = 115/164 (70%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDY 430
K V+VGDG GKTC+LI ++ +FP YVPTVF+NY A + VDG + L LWDTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 431 DRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDRE 610
DRLRPLSYP + V LICFSV +P S +NV KW E+ H C + PI+LVG K+DLR+D +
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPK 127
Query: 611 TLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGV 742
T+ LS+ P+ E+GQ +A KI A KY+ECSA E + V
Sbjct: 128 TIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEV 171
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 194 bits (472), Expect = 2e-50
Identities = 91/169 (53%), Positives = 112/169 (66%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDY 430
K V+VGDG GKTC+LI ++ +FP YVPTVF+NY A + VDG V L LWDTAGQEDY
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 431 DRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDRE 610
DRLRPLSYP + V LICF+V SP S +NV KW E+ H C PI+LV K DLR+D +
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPK 127
Query: 611 TLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGVRRGCT 757
+ LS+ P+ E+GQ +A KI A KY+ECSA E + V T
Sbjct: 128 IIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESAT 176
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 186 bits (454), Expect = 3e-48
Identities = 84/157 (53%), Positives = 110/157 (70%), Gaps = 2/157 (1%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVV--DGVAVSLGLWDTAGQE 424
K VVVGDG GKTC+LI +++ +FP YVPTVF+NY + + + L LWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 425 DYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRDD 604
+YDRLRPLSYP ++V L+CFS+ P+S NVT KWYPE++H CP PI+LVG K DLR D
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 605 RETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSA 715
R +L QG++P+ +Q Q +A + A Y+ECSA
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNA-PYVECSA 171
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 175 bits (425), Expect = 9e-45
Identities = 88/199 (44%), Positives = 121/199 (60%), Gaps = 5/199 (2%)
Frame = +2
Query: 230 MSSGRPI--KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGL 403
M +PI K VVVGDG GKT +L +T FP EYVPTVF+NY + VDG +V L L
Sbjct: 1 MLQSQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLAL 60
Query: 404 WDTAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGT 583
WDTAGQE+Y+RLRP+SY + + L+ F++ SP S ENV++KW EI CP+ P ILVG
Sbjct: 61 WDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGM 120
Query: 584 KIDLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGVRRGCT-- 757
K DLR D + + + + +K +Q + +A +I A KYMECS+L + + V T
Sbjct: 121 KADLRSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRA 180
Query: 758 -CSVKTGXXKRXQRKCLIM 811
+V+ + KC I+
Sbjct: 181 ALTVRDSENDKSSTKCCII 199
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 149 bits (361), Expect = 5e-37
Identities = 75/163 (46%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Frame = +2
Query: 233 SSGRPI--KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLW 406
S +PI K V++GDG GKT +L +T FP Y PT+F+NY + VDG ++ L LW
Sbjct: 7 SKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLW 66
Query: 407 DTAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTK 586
DTAGQE+YD+LR LSY T V +ICF+V S S ENV +KW PE+ +CP ++LV K
Sbjct: 67 DTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALK 126
Query: 587 IDLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSA 715
DLR E + E+G A KI A +Y+ECSA
Sbjct: 127 CDLRGADEE----QVDHSKIIDYEEGLAAAKKINAVRYLECSA 165
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 85.4 bits (202), Expect = 1e-17
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMV-VDGVAVSLGLWDTAGQE 424
IK +++GD VGK+C+L+ ++ DSF ++ T+ ++ + +DG + L +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 425 DYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPI-ILVGTKIDLRD 601
+ + Y L+ + VT S++NV + W+ ++ H + IL+G K D D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVRT-WFSNVEQHASENVYKILIGNKCDCED 128
Query: 602 DRETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSA 715
R+ + EQGQ LA+++ K++E SA
Sbjct: 129 QRQ------------VSFEQGQALADEL-GVKFLEASA 153
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 84.6 bits (200), Expect = 2e-17
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Frame = +2
Query: 242 RPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQ 421
R K VVVGDG VGK+ + I F EY PT+ D+Y +DG L + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 422 EDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDA-PIILVGTKIDLR 598
E+Y +R + FL+ +++TS SS++ +++ + ++ D P++LV K DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLE 126
Query: 599 DDRETLSLLSEQ 634
+R EQ
Sbjct: 127 AERVVSRAEGEQ 138
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 81.0 bits (191), Expect = 2e-16
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 242 RPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTV-FDNYSAPMVVDGVAVSLGLWDTAG 418
R K V +G+ +VGKT ++ + D F Y T+ D S M ++ V L LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 419 QEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIK-HHCPDAPIILVGTKIDL 595
QE + L P + V +I + +T+ +S+ N T KW +++ D I+LVG K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 596 RDDRETLSLLSEQGMSPLK 652
D R+ E+ LK
Sbjct: 129 ADKRQVTQEEGEKKAKELK 147
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 75.8 bits (178), Expect = 8e-15
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTV-FDNYSAPMVVDGVAVSLGLWDTAGQE 424
+K V++GD VGKTC++ + F EY T+ D + +VVD V+L LWDTAGQE
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 425 DYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPD----APIILVGTKID 592
+ L Y D +I ++V + S+++V W E + P I+VG +ID
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQID 127
Query: 593 LRDDRETLSL 622
+ +SL
Sbjct: 128 KDASKRAVSL 137
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 73.7 bits (173), Expect = 3e-14
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTV---FDNYSAPMVVDGVAVSLGLWDTAGQ 421
K V++GD VGK+ +++ + D F T+ F + P + + +V L +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLP-IDENTSVKLEIWDTAGQ 74
Query: 422 EDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPII-LVGTKIDLR 598
E Y L P+ Y + ++ + +T +S E S W E++ P+ +I L G K+DL
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKS-WIKELQRQAPEGIVIALAGNKLDLA 133
Query: 599 DDRETL 616
+R +
Sbjct: 134 QERRAV 139
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 73.3 bits (172), Expect = 4e-14
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTV-FDNYSAPMVVDGVAVSLGLWDTAGQED 427
K V+VGDG GKT + + T F +Y+ T+ + + + + +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 428 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLRD 601
LR Y Q +I F VTS +Y+NV W+ ++ C + PI+L G K+D+++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNV-PHWWRDLVRVCENIPIVLCGNKVDVKE 127
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSA-PMVVDGVAVSLGLWDTAGQED 427
K +++GD VGK+C+L+ + D++ Y+ T+ ++ ++G V L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 428 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPD-APIILVGTKIDLRDD 604
+ + Y +I + VT S+ NV +W EI + + +LVG K D+ D
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNV-KQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 605 R 607
+
Sbjct: 129 K 129
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 70.5 bits (165), Expect = 3e-13
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAP-MVVDGVAVSLGLWDTAGQED 427
K V++GD VGK+ +L+ +T + F E T+ ++ +V+D + +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 428 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHC-PDAPIILVGTKIDL 595
Y + Y LI + +T SS++NV +W E++ H + I+LVG K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL 127
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 68.9 bits (161), Expect = 9e-13
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTV-FDNYSAPMVVDGVAVSLGLWDTAGQE 424
+K +++G+ VGKT ++ Y F +Y T+ D + ++VD V+L LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 425 DYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHC----PDA-PIILVGTKI 589
+ L Y D ++ + V + S+E + S W E P+ P IL+G K+
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDS-WRDEFLIQASPSNPETFPFILLGNKV 127
Query: 590 DLRDDRETLS 619
D+ + + +S
Sbjct: 128 DVEEQKRMVS 137
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 61.7 bits (143), Expect = 1e-10
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMV-VDGVAVSLGLWDTAGQE 424
IK ++GD ++GKT ++++Y SF E T+ N+ + + ++ +WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 425 DYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKID 592
++ + P+ L F ++ S+ ++ +WY + + A IL+GTK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDLSRKSTLNSI-KEWYRQARGFNKTAVPILIGTKYD 125
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 60.5 bits (140), Expect = 3e-10
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDY 430
+ V+G +VGK+ + + Y + F Y PT+ + +S + G + + DTAGQ++Y
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEY 67
Query: 431 DRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPD-APIILVGTKIDLRDDR 607
L +++ +S+TS SS+E V + H + PI++VG K DL R
Sbjct: 68 SILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQR 127
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 58.0 bits (134), Expect = 2e-09
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Frame = +2
Query: 248 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVA-----VSLGLWDT 412
+K V+ G GK+C+L + + + + TV ++++ ++ G+ + L +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 413 AGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDA-PIILVGTKI 589
AGQE + + Y ++ + VT+ S+E ++S W +I+ P ++L G+K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSS-WLSDIRAMAPSTICVVLAGSKS 128
Query: 590 DLRDDRE 610
DL++ R+
Sbjct: 129 DLQNQRQ 135
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 44.0 bits (99), Expect = 3e-05
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = +2
Query: 242 RPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVA-VSLGLWDTAG 418
+ ++ V+ GD VGK+ LIS +P VF S P D VSL L DT
Sbjct: 2 KEVRVVICGDQGVGKSS-LISALIQEDNVTSIPKVFPIISIPSNPDSNDDVSLVLVDT-- 58
Query: 419 QEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKIDLR 598
Q D + L+ +IC + SYE V+ W P + + PI+L K +
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDL 118
Query: 599 DDRETLSLLSEQGMSPLKRE 658
D+ + L + E M PL E
Sbjct: 119 DNYQGLHTI-EHEMIPLINE 137
Score = 32.3 bits (70), Expect = 0.094
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +2
Query: 254 CVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWDTAGQEDYD 433
C VVG + GKT +L S+ ++ TV ++ + +S G+ D D
Sbjct: 424 CFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEFQSTQRYLVLS-----EIGETDLD 478
Query: 434 RL-RPLSYPQTDVFLICFSVTSPSSYENVTS--KWYPEIKHHCPDAPIILVGTKIDL 595
L P S D+ + + ++P+S+ + + YP+++ P + TK DL
Sbjct: 479 ILAEPKSLEACDILCLLYDSSNPNSFSFIANLLNLYPDLQ----KIPCVFAATKADL 531
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 254 CVVVGDGTVGKTCML 298
C++VGD GKTC+L
Sbjct: 1872 CILVGDTATGKTCIL 1886
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = -1
Query: 390 TATPSTTIGAE*LSKTVGTYSPGKLSVVYEI------NIQVFPTVPSPTTTHLIGLPEDI 229
TA P +G + KT+G S GK+ +V I +++ P P+ T+ + + +
Sbjct: 43 TAGPGRQVGNWIIKKTIGAGSMGKVKLVVNILTGEKAALKMIPFTPN-NTSQTVRVQREA 101
Query: 228 LYGALRQVLNYINYILFVR 172
L G L + N I +R
Sbjct: 102 LLGRLLRHPNICRVIDCIR 120
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 279 TVPSPTTTHLIGLPEDILYGALRQVLNYINYILFVRFNHN 160
T P+ T ++ LPE+I LR + IL+ + N+N
Sbjct: 171 TDPNNTAVYVHQLPENITTQELRSYFLHFGEILYTQVNNN 210
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 333 YSPGKLSVVYEINIQVFPTVPSPTT 259
+SP K+S + ++ P+ PSPTT
Sbjct: 682 FSPMKISPIRASPVKTIPSSPSPTT 706
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,255,157
Number of Sequences: 5004
Number of extensions: 68457
Number of successful extensions: 236
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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