Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D07
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   333   5e-93
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   160   6e-41
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            61   4e-11
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    24   5.3  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   5.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.3  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  333 bits (818), Expect = 5e-93
 Identities = 154/180 (85%), Positives = 164/180 (91%)
 Frame = +2

Query: 230 MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVVDGVAVSLGLWD 409
           MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT FDNYSAPMVVDGV VSLGLWD
Sbjct: 1   MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWD 60

Query: 410 TAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKI 589
           TAGQEDYDRLRPLSYPQTDVFLIC+SV SPSS+ENVTSKWYPEIKHHCPDAPIILVGTKI
Sbjct: 61  TAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKI 120

Query: 590 DLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGVRRGCTCSVK 769
           DLR+DRET+SLL++QG+S LKREQGQKLANKIRA KYMECSAL +  L  V     C+ +
Sbjct: 121 DLREDRETISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEALCATE 180


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  160 bits (388), Expect = 6e-41
 Identities = 73/131 (55%), Positives = 91/131 (69%)
 Frame = +2

Query: 410 TAGQEDYDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHCPDAPIILVGTKI 589
           +AGQEDYDRLRPLSYPQTDVFL+CFSV SPSS+ENV  KW PEI HHC   P +LVGT+I
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 590 DLRDDRETLSLLSEQGMSPLKREQGQKLANKIRAXKYMECSALXKEALTGVRRGCTCSVK 769
           DLRD+  TL  L++    P+  EQG+KLA +++A KY+ECSAL ++ L  V      +  
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAAL 120

Query: 770 TGXXKRXQRKC 802
                  +RKC
Sbjct: 121 EPPEPTKKRKC 131


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 61.3 bits (142), Expect = 4e-11
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
 Frame = +2

Query: 251 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNY-SAPMVVDGVAVSLGLWDTAGQED 427
           K V++G+  VGK+ +++ +    F      T+   + +  + +D   V   +WDTAGQE 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 428 YDRLRPLSYPQTDVFLICFSVTSPSSYENVTSKWYPEIKHHC-PDAPIILVGTKIDLRDD 604
           Y  L P+ Y      ++ + + +  S+    + W  E++    P+  I L G K DL + 
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKT-WVKELQRQASPNIVIALAGNKADLANS 144

Query: 605 R 607
           R
Sbjct: 145 R 145


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 273 VPSEKLVC*FHTRLIAFQENMCLQFLTITRLQWW 374
           VP  +LV          +E  CL F   T L+WW
Sbjct: 46  VPKHRLVQYLAYEFPPDEETKCLIFCVGTDLRWW 79


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 273 VPSEKLVC*FHTRLIAFQENMCLQFLTITRLQWW 374
           VP  +LV          +E  CL F   T L+WW
Sbjct: 46  VPKHRLVQYLAYEFPPDEETKCLIFCVGTDLRWW 79


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 581  TKIDLRDDRETLSLLSEQGMSPLKREQGQKLANK 682
            T  DL + R+ L    E G+S L+  Q Q +AN+
Sbjct: 3230 TTKDLPEIRKYLQKRLENGLSDLELLQSQAVANR 3263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,237
Number of Sequences: 2352
Number of extensions: 16935
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)