Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D06
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0222 - 21413676-21413696,21413813-21413896,21414042-214143...    29   6.4  

>11_06_0222 -
           21413676-21413696,21413813-21413896,21414042-21414305,
           21414495-21414592,21414691-21414796,21414872-21414960,
           21415048-21415170,21415379-21415566,21416069-21416172,
           21416743-21416838,21417061-21417159
          Length = 423

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
 Frame = +1

Query: 16  DLTIGNSLRFWDLGVTTETVPD--AMIETVRDAMTGTLPDAMTEMVPDVTIGMVPGVTIG 189
           +L+ G+SL  W++    E  PD  +  E + DA TG  P    ++      G        
Sbjct: 290 ELSFGDSLYLWEMMWALEYDPDIFSTYEHI-DAATGVTPGHRQKVKSIRQFGKYE--RDN 346

Query: 190 MVPGATTETDLDVTIVIVALRRLVAMKNLAILKAAVGKKCGVDFLLHLINTHN 348
           M  GAT++ D  V I +  +  ++   +  +L+ A     G+D ++ ++N  N
Sbjct: 347 MKNGATSDNDGPVPISVFLVASVLKENSAKLLQEA----RGIDDVIRILNDVN 395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,975,115
Number of Sequences: 37544
Number of extensions: 359460
Number of successful extensions: 903
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)