Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_D06
(866 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001735-1|AAN71490.1| 840|Drosophila melanogaster RE72291p pro... 30 3.6
AY052035-1|AAK93459.1| 379|Drosophila melanogaster LP03286p pro... 30 3.6
AJ276417-1|CAB77666.1| 790|Drosophila melanogaster putative GM1... 30 3.6
AE013599-3341|AAF46803.2| 795|Drosophila melanogaster CG11061-P... 30 3.6
AE013599-3340|AAF46804.2| 755|Drosophila melanogaster CG11061-P... 30 3.6
AF231134-1|AAF36977.1| 472|Drosophila melanogaster cyclin-depen... 30 4.7
AE014134-1830|AAF52906.1| 472|Drosophila melanogaster CG5387-PA... 30 4.7
AF154416-1|AAD38395.1| 474|Drosophila melanogaster Cdk5 activat... 29 6.3
>BT001735-1|AAN71490.1| 840|Drosophila melanogaster RE72291p
protein.
Length = 840
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 267 HRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHVWDHLCHRVWER-PCHRVSDRL 91
H + G HD H + HP+ H DHP+ H +H + E P +RL
Sbjct: 628 HHNAGDHGHPHD-HPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERL 686
Query: 90 YHR 82
R
Sbjct: 687 QSR 689
>AY052035-1|AAK93459.1| 379|Drosophila melanogaster LP03286p
protein.
Length = 379
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 267 HRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHVWDHLCHRVWER-PCHRVSDRL 91
H + G HD H + HP+ H DHP+ H +H + E P +RL
Sbjct: 167 HHNAGDHGHPHD-HPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERL 225
Query: 90 YHR 82
R
Sbjct: 226 QSR 228
>AJ276417-1|CAB77666.1| 790|Drosophila melanogaster putative GM130
protein protein.
Length = 790
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 267 HRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHVWDHLCHRVWER-PCHRVSDRL 91
H + G HD H + HP+ H DHP+ H +H + E P +RL
Sbjct: 578 HHNAGDHGHPHD-HPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERL 636
Query: 90 YHR 82
R
Sbjct: 637 QSR 639
>AE013599-3341|AAF46803.2| 795|Drosophila melanogaster CG11061-PA,
isoform A protein.
Length = 795
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 267 HRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHVWDHLCHRVWER-PCHRVSDRL 91
H + G HD H + HP+ H DHP+ H +H + E P +RL
Sbjct: 583 HHNAGDHGHPHD-HPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERL 641
Query: 90 YHR 82
R
Sbjct: 642 QSR 644
>AE013599-3340|AAF46804.2| 755|Drosophila melanogaster CG11061-PB,
isoform B protein.
Length = 755
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -3
Query: 267 HRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHVWDHLCHRVWER-PCHRVSDRL 91
H + G HD H + HP+ H DHP+ H +H + E P +RL
Sbjct: 543 HHNAGDHGHPHD-HPHDHTHDHSHSHPHDHQHDHPHDHGQNHAHRQAAETLPTAEAVERL 601
Query: 90 YHR 82
R
Sbjct: 602 QSR 604
>AF231134-1|AAF36977.1| 472|Drosophila melanogaster
cyclin-dependent kinase 5 regulatorysubunit protein.
Length = 472
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 330 MKKKINAALLANRCFQDREVFHRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHV 151
++ K A L CF+ + + A D +R++++ C R +H +H HP+ H
Sbjct: 157 IENKNKCANLPTACFKAQLL--ESSFASSSDKNRNIQLH-CNRIDEHNQQHCNQHPHPHP 213
Query: 150 WDH 142
H
Sbjct: 214 HQH 216
>AE014134-1830|AAF52906.1| 472|Drosophila melanogaster CG5387-PA
protein.
Length = 472
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 330 MKKKINAALLANRCFQDREVFHRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHV 151
++ K A L CF+ + + A D +R++++ C R +H +H HP+ H
Sbjct: 157 IENKNKCANLPTACFKAQLL--ESSFASSSDKNRNIQLH-CNRIDEHNQQHCNQHPHPHP 213
Query: 150 WDH 142
H
Sbjct: 214 HQH 216
>AF154416-1|AAD38395.1| 474|Drosophila melanogaster Cdk5
activator-like protein protein.
Length = 474
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 330 MKKKINAALLANRCFQDREVFHRDEAAEGDDHDRHVEVRLCRRAWDHPYRHAWDHPYRHV 151
++ K A L CF+ + + A D +R++++ C R +H +H HP+ H
Sbjct: 157 IENKNKCANLPTACFKAQLL--ESSFASSSDKNRNIQLH-CNRIDEHNQQHCNQHPHPHP 213
Query: 150 WDH 142
H
Sbjct: 214 HPH 216
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,073,653
Number of Sequences: 53049
Number of extensions: 649914
Number of successful extensions: 2266
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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