Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D06
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CT...    31   1.4  
Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    30   2.5  
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    30   2.5  
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    30   2.5  
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF016678-3|AAB66150.2|  297|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z50044-5|CAA90357.2|  332|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine rece...    28   7.5  
U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine rece...    28   7.5  
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami...    28   7.5  

>Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical
           protein F58G11.5 protein.
          Length = 675

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -2

Query: 481 WILDFLKYVSFSLCELIIRY---EVMFAFNGTFLRLHLARTRNEMQFHCVY*LNEEENQR 311
           WI ++    S  L E+I+ +   +V    +G +LRLH+    N+  FHC     +EENQ 
Sbjct: 132 WIFEYC--TSDQLREIILSFLLNKVKDEASGEYLRLHILYLINDWAFHCQ--RKKEENQM 187

Query: 310 R 308
           +
Sbjct: 188 K 188


>AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CTD
           associated factor 6 protein.
          Length = 675

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -2

Query: 481 WILDFLKYVSFSLCELIIRY---EVMFAFNGTFLRLHLARTRNEMQFHCVY*LNEEENQR 311
           WI ++    S  L E+I+ +   +V    +G +LRLH+    N+  FHC     +EENQ 
Sbjct: 132 WIFEYC--TSDQLREIILSFLLNKVKDEASGEYLRLHILYLINDWAFHCQ--RKKEENQM 187

Query: 310 R 308
           +
Sbjct: 188 K 188


>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +3

Query: 369 VRARCKRRKVPLKANITSYRMISSHSENETYFKKSRIQAFDYKQNRI 509
           +R R K++K  +   +T+Y M++S S+++ +FK   +    Y +  +
Sbjct: 483 LRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHM 529


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +3

Query: 369 VRARCKRRKVPLKANITSYRMISSHSENETYFKKSRIQAFDYKQNRI 509
           +R R K++K  +   +T+Y M++S S+++ +FK   +    Y +  +
Sbjct: 483 LRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHM 529


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 195 DHPYRHAWDHPYRHV-WDHLCHRVWERPCHRVSDRLYHR 82
           D P      H Y H  W    HR+W+  C +V D + HR
Sbjct: 88  DFPSNFLNIHDYHHRRWALHLHRIWKDLCRKVRDDVKHR 126


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 195 DHPYRHAWDHPYRHV-WDHLCHRVWERPCHRVSDRLYHR 82
           D P      H Y H  W    HR+W+  C +V D + HR
Sbjct: 88  DFPSNFLNIHDYHHRRWALHLHRIWKDLCRKVRDDVKHR 126


>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
           protein F44E2.4 protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 8/32 (25%), Positives = 22/32 (68%)
 Frame = -3

Query: 330 MKKKINAALLANRCFQDREVFHRDEAAEGDDH 235
           +++++N  ++A +CF+D++   ++   +GD H
Sbjct: 382 LQEEVNDLIIAGKCFEDKKEEEKEPVNDGDFH 413


>AF016678-3|AAB66150.2|  297|Caenorhabditis elegans Hypothetical
           protein K07E8.5 protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 521 ECVTIKVLPCYKNRLVCTQ*CKLK*CVVIILLCFSFVFNKYFIL 652
           +C  + VLP    +L CT       CVV++L+CF +    +F L
Sbjct: 84  DCFIMVVLPESVKQLYCTPRRAKITCVVLMLICFIYNIPHFFEL 127


>Z50044-5|CAA90357.2|  332|Caenorhabditis elegans Hypothetical
           protein F22B5.5 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 439 HTVKTRHTLKNLESRRLIISKTESVVNRVCYNKS 540
           H VK  +++   E +  I++K ++ V RV YNKS
Sbjct: 193 HVVKYDNSIFPYERKEYILAKFKNGVGRVAYNKS 226


>U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 14 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +3

Query: 615 FVFLLYSINILFFNGTRGHIYTCLFRKGILCSSDYVYNIYWDISIAXFFSFLNKRLPVYF 794
           F F+  +I +L        I   +    ++ S  + + + + I  + FFS+ +   PVY 
Sbjct: 215 FTFICTAITLLKLPERSKEIEKAISNATVIISIGFTFKVLFQIYYSFFFSYTDASSPVYG 274

Query: 795 F 797
           F
Sbjct: 275 F 275


>U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 13 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = -2

Query: 562 TVFITWQH---FYCNTLCSLLIR 503
           T+ IT+ H   F CNT+CS+L+R
Sbjct: 241 TLIITFTHLLFFGCNTICSILVR 263


>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
            protein 10 protein.
          Length = 2302

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +1

Query: 70   TVPDA--MIETVRDAM-TGTLPDAMTEMVPDVTIGMVPGVTIGMV 195
            T+P++    +T+R A+ T T+P  +   VP+     +PG+T+ +V
Sbjct: 1552 TIPESAHQTQTLRSAVHTPTVPKILGVTVPEPLRSTIPGITVDLV 1596


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,809,154
Number of Sequences: 27780
Number of extensions: 369360
Number of successful extensions: 968
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)