Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D06
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   2.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.4  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 268 KNLAILKAAVGKKCGVDFLLHLINT 342
           K++  L  A+G   GV  LLH++ T
Sbjct: 111 KHIVRLVTAIGDAYGVALLLHMLTT 135


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 426 RMISSHSENETYFKKSRIQAFDYKQNRISSEQSVLQ*KCCHVIKT 560
           R+ S H ENE+  K    +A    + +I S +  +  K    I+T
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKIESGEGTIPVKSSEGIQT 420


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 820 DYRNSYCFYVTNNAF 864
           D+RNS  + +TNN F
Sbjct: 212 DFRNSRSWRITNNLF 226


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 795 KSIQAGVYSKKKKNXLWKYPNRY 727
           K I + +Y ++    +W   N+Y
Sbjct: 358 KQISSNIYERQNNEYIWIVSNKY 380



 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 785 RQAFIQKRKKTGYGNIPIDIIYIVGRT 705
           RQA IQ  +     N+PID+    G+T
Sbjct: 51  RQAAIQSGEYNYKNNVPIDVDRWNGKT 77


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 318 INAALLANRCFQDR 277
           +NA +L N C+Q+R
Sbjct: 90  LNATVLPNSCYQER 103


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 318 INAALLANRCFQDR 277
           +NA +L N C+Q+R
Sbjct: 90  LNATVLPNSCYQER 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,296
Number of Sequences: 438
Number of extensions: 4543
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)