Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D04
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938...    48   1e-05
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962...    47   2e-05
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    45   7e-05
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689...    45   1e-04
03_05_0593 - 25959013-25959789                                         31   1.7  

>07_01_1199 +
           11391638-11391718,11393477-11393590,11393690-11393826,
           11393905-11394064
          Length = 163

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = +1

Query: 73  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 213
           M++  C +    +YPGHG   V+ D K F F  SKC     M+RNPR
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47


>05_05_0279 -
           23794964-23795111,23795486-23795634,23796120-23796221,
           23796309-23796384,23796578-23796588
          Length = 161

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = +1

Query: 73  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 210
           +K  LC +SG KIYPG G   ++ D + F F NSKC+     R  P
Sbjct: 3   LKTELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 48



 Score = 37.1 bits (82), Expect = 0.019
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 KVTWTVLYRRKFKKG-QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 373
           K+TWT +YR++ KK    E                IVGASL  I  KR  KPEV
Sbjct: 50  KLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEV 103


>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
            34673237-34675178,34675588-34675658,34676158-34676307,
            34676963-34677038,34677131-34677232,34677707-34677855,
            34678214-34678364
          Length = 1172

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +1

Query: 85   LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 210
            LC +SG KIYPG G   ++ D + F F NSKC+     R  P
Sbjct: 1017 LCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKP 1058



 Score = 37.1 bits (82), Expect = 0.019
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215  KVTWTVLYRRKFKKG-QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 373
            K+TWT +YR++ KK    E                IVGA+L  I  KR+ KPEV
Sbjct: 1060 KLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEV 1113


>07_01_0849 +
           6896930-6896996,6897453-6897474,6897615-6897690,
           6897775-6897876,6898156-6898304,6898637-6898784
          Length = 187

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = +1

Query: 67  VKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 210
           +K+   LC +SG KIYPG G   ++ D + F F NSKC+     R  P
Sbjct: 27  LKVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCKRYFHNRLKP 74



 Score = 35.9 bits (79), Expect = 0.044
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 KVTWTVLYRRKFKKG-QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 373
           K+TWT +YR++ KK    E                IVGA+L  I  KR  KPEV
Sbjct: 76  KLTWTAMYRKQHKKDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEV 129


>03_05_0593 - 25959013-25959789
          Length = 258

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 333 SEAPTIARWNFWVLLVRFFACSSSWP-FLNLRLYRTVHVTLXRIPPHQMG 187
           +E P+ +     +L  + F CSS+ P FL+ R  R  HV +   PP   G
Sbjct: 46  AEGPSSSMSPTSILETKQFCCSSAMPPFLSERSLRKAHVEMAAAPPEPAG 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,424,029
Number of Sequences: 37544
Number of extensions: 250995
Number of successful extensions: 441
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)