Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D03
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.         31   4.2  
AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.     31   4.2  
BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphat...    31   7.4  
AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein.             31   7.4  
BC050643-1|AAH50643.1|  196|Homo sapiens SERTA domain containing...    30   9.8  
BC014061-1|AAH14061.1|  196|Homo sapiens SERTA domain containing...    30   9.8  
AF192529-1|AAF05761.1|  196|Homo sapiens RPA-binding trans-activ...    30   9.8  

>BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.
          Length = 823

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +3

Query: 306 LGIPEADDPW-KKIVEASPPDSIWHSLRNCVAYQAGVWQNLITKGIDDVMQPAAF--KLA 476
           LG+P A  P  ++  +   P S W  +RN   +     QN+I   + +VM P  F   L 
Sbjct: 81  LGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLD 140

Query: 477 IVLRHT--PTEDCAKL 518
           +V  +    +EDC  L
Sbjct: 141 VVSSYVQDQSEDCLYL 156


>AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.
          Length = 826

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +3

Query: 306 LGIPEADDPW-KKIVEASPPDSIWHSLRNCVAYQAGVWQNLITKGIDDVMQPAAF--KLA 476
           LG+P A  P  ++  +   P S W  +RN   +     QN+I   + +VM P  F   L 
Sbjct: 84  LGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLD 143

Query: 477 IVLRHT--PTEDCAKL 518
           +V  +    +EDC  L
Sbjct: 144 VVSSYVQDQSEDCLYL 159


>BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphatase
           domain containing 1 protein.
          Length = 1222

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 282 YAPPSNLDAQGMTLPYSILPTN*ALVPVYTRPDRFRRADVTKYTTADGSVGR 127
           Y+P SN+   G  +    +PT+   V VYT    +  A+  K    DG V R
Sbjct: 222 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 273


>AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein.
          Length = 1255

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 282 YAPPSNLDAQGMTLPYSILPTN*ALVPVYTRPDRFRRADVTKYTTADGSVGR 127
           Y+P SN+   G  +    +PT+   V VYT    +  A+  K    DG V R
Sbjct: 234 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 285


>BC050643-1|AAH50643.1|  196|Homo sapiens SERTA domain containing 3
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +2

Query: 626 KRPVR-PPRPPGATCCSTGTWSW 691
           K P R PP PP    C+ G+W W
Sbjct: 161 KEPARAPPEPPHNLFCAPGSWEW 183


>BC014061-1|AAH14061.1|  196|Homo sapiens SERTA domain containing 3
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +2

Query: 626 KRPVR-PPRPPGATCCSTGTWSW 691
           K P R PP PP    C+ G+W W
Sbjct: 161 KEPARAPPEPPHNLFCAPGSWEW 183


>AF192529-1|AAF05761.1|  196|Homo sapiens RPA-binding
           trans-activator protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +2

Query: 626 KRPVR-PPRPPGATCCSTGTWSW 691
           K P R PP PP    C+ G+W W
Sbjct: 161 KEPARAPPEPPHNLFCAPGSWEW 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,360,964
Number of Sequences: 237096
Number of extensions: 2532418
Number of successful extensions: 7872
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7872
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)