Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D03
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3918|AAF47241.2|  308|Drosophila melanogaster CG3579-PA...    48   2e-05
AY061127-1|AAL28675.1|  509|Drosophila melanogaster LD11031p pro...    29   8.6  
AE013599-3956|AAF47272.2|  509|Drosophila melanogaster CG3589-PA...    29   8.6  

>AE013599-3918|AAF47241.2|  308|Drosophila melanogaster CG3579-PA
           protein.
          Length = 308

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +1

Query: 670 LYGDLELAILAASREEYDAHAKLVRAEYSKLTQDNYVELRIKVLNQFSXIPKL 828
           L  D++L +LAAS EEY  +  L+R+EY+ L    Y  +RIKVL     IP +
Sbjct: 228 LLQDVDLVVLAASPEEYKHYTTLLRSEYANLDDATYKAMRIKVLETLLMIPSI 280


>AY061127-1|AAL28675.1|  509|Drosophila melanogaster LD11031p
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 449 DVIDALCDQVLPDPRLIGNAV-S*GMPYGIRW*SFYDFLPWVVRFRYSKCGT 297
           DV +  C ++   P  +G  V + G PY + +   +DF P + + R  KC T
Sbjct: 366 DVPEQCCVRLARSPATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDT 417


>AE013599-3956|AAF47272.2|  509|Drosophila melanogaster CG3589-PA
           protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 449 DVIDALCDQVLPDPRLIGNAV-S*GMPYGIRW*SFYDFLPWVVRFRYSKCGT 297
           DV +  C ++   P  +G  V + G PY + +   +DF P + + R  KC T
Sbjct: 366 DVPEQCCVRLARSPATVGQMVYNAGFPYYVNFSFRHDFNPSIFQGRVIKCDT 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,875,472
Number of Sequences: 53049
Number of extensions: 805486
Number of successful extensions: 2350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)