Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D02
         (930 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.9  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +2

Query: 275 PLPPAHLYTYFQFTTLVNDNLSSEHTYLAPRSLVEVLTRFQVDELHFTLTE 427
           PL   H Y  F +T   + + +S H Y A         + Q D L+   T+
Sbjct: 274 PLAYQHEYNSFNWTANGHGHNTSSHNYYAQNYAPTYYGQMQPDYLNSQTTQ 324


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 533 WKKFSSTLAG---LFCASLNFIEDF 598
           WK   ++L     LFCASL+F + F
Sbjct: 60  WKVLYTSLTSFGYLFCASLSFYKAF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,953
Number of Sequences: 336
Number of extensions: 3619
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)