Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_D02
         (930 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p pro...   134   2e-31
AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-P...   134   2e-31

>AY071437-1|AAL49059.1|  633|Drosophila melanogaster RE52151p
           protein.
          Length = 633

 Score =  134 bits (324), Expect = 2e-31
 Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 7/152 (4%)
 Frame = +2

Query: 197 LFFIAVFIETIFNANGDLFNEELFIKPLPPAHLYTYFQFTTLVN----DNLSSEHTYLAP 364
           L  +A   +     + + F+EEL ++PL   H+ TYFQFTT  +    DNL   HT L P
Sbjct: 9   LLLVAPNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTRWHYGEKDNLY--HTQLTP 66

Query: 365 RSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAPGAELYAWFS-SDVEN--VDTQW 535
           R + E+L +F V ELH  LT+G WR+  WGYP+++A  GAE++AWFS +++ N  VD QW
Sbjct: 67  RVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNRDVDRQW 126

Query: 536 KKFSSTLAGLFCASLNFIEDFNTITPQMALQP 631
           K+ ++  +G+ CASLNF+++ N+I P+  ++P
Sbjct: 127 KELANVFSGVLCASLNFVDNTNSIAPRHLIRP 158


>AE014298-1169|AAF46367.1|  633|Drosophila melanogaster CG11190-PA
           protein.
          Length = 633

 Score =  134 bits (324), Expect = 2e-31
 Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 7/152 (4%)
 Frame = +2

Query: 197 LFFIAVFIETIFNANGDLFNEELFIKPLPPAHLYTYFQFTTLVN----DNLSSEHTYLAP 364
           L  +A   +     + + F+EEL ++PL   H+ TYFQFTT  +    DNL   HT L P
Sbjct: 9   LLLVAPNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTRWHYGEKDNLY--HTQLTP 66

Query: 365 RSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAPGAELYAWFS-SDVEN--VDTQW 535
           R + E+L +F V ELH  LT+G WR+  WGYP+++A  GAE++AWFS +++ N  VD QW
Sbjct: 67  RVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNRDVDRQW 126

Query: 536 KKFSSTLAGLFCASLNFIEDFNTITPQMALQP 631
           K+ ++  +G+ CASLNF+++ N+I P+  ++P
Sbjct: 127 KELANVFSGVLCASLNFVDNTNSIAPRHLIRP 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,658,162
Number of Sequences: 53049
Number of extensions: 608887
Number of successful extensions: 1227
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)