Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_C22
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.29
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.38
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.38
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.52
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.52
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.52
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.66
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.66
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.2
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 35.5 bits (78), Expect = 0.054
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 319 GXXPPXXFXGGPXPPXXPXARXXPPPXPWG 230
G PP + GGP PP P R PPP G
Sbjct: 806 GPRPPYPYPGGPVPPGPPQNRMPPPPPAQG 835
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
PPP PP G G P P GG PP G PP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 228 PPQGXGGGXXRAXGXXGGXGPPXXXXGGXXPXKXKXXXGXXPPKKEKRGXXXFPPNP 398
PP G GG GG PP GG P PP G PP P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 321 GGXPXPPXFXGAXXXXXPLRPGXXXPXPLGGGXXXXPPGXGXGV 190
G P PP F G P+ G P P+ G PP G GV
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 319 GXXPPXXFXGGPXPPXXPXARXXPPPXP-WGGXXXXXPWXG 200
G PP GG PP A PPP P GG P G
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 371 PFFFFGGXAPXXXFXFXGGXPXXXXXGGPPPPXXPXGPGXXXPXP 237
P F GG P G P G PPPP P G G P
Sbjct: 87 PPMFAGGIPPPPPM-MGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP P+G GP G G GGPP G PP
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXG 312
PPP G P+G GP GGGG P+ G
Sbjct: 133 PPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 170
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP G P G G GP G G GGPP G PP
Sbjct: 164 PRGPPGGMGG---PPGHGGMG-GPPGHGGQGGPPGHGGMGGPP 202
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP P+G GP G G GGPP G PP
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP 473
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXG 312
PPP G P+G GP GGGG P+ G
Sbjct: 413 PPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGG 450
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP G P G G GP G G GGPP G PP
Sbjct: 444 PRGPPGGMGG---PPGHGGMG-GPPGHGGQGGPPGHGGMGGPP 482
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PPP G P G P P G G P G PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -1
Query: 320 GGXPXXXXXGGPPPPXXPXG--PGXXXPXPLGGXXXXXPLGGG 198
GG P G PPPP P G P P P G P G G
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPPAGTG 348
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
PPPR PP G G GG P G PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 29.1 bits (62), Expect(2) = 0.52
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPXGGPPXXPPPIPXXPPXGQXP 864
PP G P PPP PP G P
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLP 334
Score = 21.8 bits (44), Expect(2) = 0.52
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 628 PKXGXKTPQXXGRGPPXKXPKPXPP 702
P G P G PP P PP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PPP G P G P P G G P G PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -1
Query: 320 GGXPXXXXXGGPPPPXXPXG--PGXXXPXPLGGXXXXXPLGGG 198
GG P G PPPP P G P P P G P G G
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPPAGTG 333
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
PPPR PP G G GG P G PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 29.1 bits (62), Expect(2) = 0.52
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPXGGPPXXPPPIPXXPPXGQXP 864
PP G P PPP PP G P
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLP 319
Score = 21.8 bits (44), Expect(2) = 0.52
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 628 PKXGXKTPQXXGRGPPXKXPKPXPP 702
P G P G PP P PP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPP 289
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PPP G P G P P G G P G PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -1
Query: 320 GGXPXXXXXGGPPPPXXPXG--PGXXXPXPLGGXXXXXPLGGG 198
GG P G PPPP P G P P P G P G G
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG-GSPPPAGTG 327
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 199 PPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
PPPR PP G G GG P G PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 29.1 bits (62), Expect(2) = 0.52
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPXGGPPXXPPPIPXXPPXGQXP 864
PP G P PPP PP G P
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLP 313
Score = 21.8 bits (44), Expect(2) = 0.52
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 628 PKXGXKTPQXXGRGPPXKXPKPXPP 702
P G P G PP P PP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPP 283
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXP 318
P PPP PP PGP G G PP G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXP 318
P PPP PP PGP G G PP G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -1
Query: 356 GGXAPXXXFXFXGGXPXXXXXGGPPPPXXPXGPGXXXPXPLGGXXXXXPLGGGXG 192
GG + GG PPPP P P P GG GGG G
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -1
Query: 356 GGXAPXXXFXFXGGXPXXXXXGGPPPPXXPXGPGXXXPXPLGGXXXXXPLGGGXG 192
GG + GG PPPP P P P GG GGG G
Sbjct: 279 GGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 290 GPPPPXXPXGPGXXXPXPLGGXXXXXPLGGGXG 192
GPPPP P PG P G P GG G
Sbjct: 410 GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPG 442
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 317 GXPXXXXXGGPPPPXXPXGPGXXXPXPLGGXXXXXPLGGGXG 192
G P G PPP P GPG P P G P G G
Sbjct: 424 GPPQGGPGGFGPPP--PGGPGAYGPPPTGFPPVGAPPPGAAG 463
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/80 (25%), Positives = 22/80 (27%)
Frame = +1
Query: 649 PQXXGRGPPXKXPKPXPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXGGPPXXPP 828
P G P + PKP P P GPP P
Sbjct: 209 PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
Query: 829 PIPXXPPXGQXPGXXGXAXT 888
P P PP + PG G T
Sbjct: 269 PGPPGPPTRRPPGHQGHHIT 288
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 190 HPXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
HP PP+ P PGP G G G P PP
Sbjct: 129 HPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 319 GXXPPXXFXGGPXPPXXPXARXXPPPXP 236
G PP GGP PP P PPP P
Sbjct: 749 GGLPP--ISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 319 GXXPPXXFXGGPXPPXXPXARXXPPPXP 236
G PP GGP PP P PPP P
Sbjct: 749 GGLPP--ISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 319 GXXPPXXFXGGPXPPXXPXARXXPPPXP 236
G PP GGP PP P PPP P
Sbjct: 332 GGLPP--ISGGPPPPPPPPGGCPPPPPP 357
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 317 GXPXXXXXGGPPPPXXPXGPGXXXPXPLGGXXXXXPLGGGXG 192
G P P PP P G G P GG GGG G
Sbjct: 302 GGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGG 343
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 796 PPXGGPPXXPPPIPXXPPXGQXP 864
PP PP PPP+P PP P
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPMP 89
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 PXPP-PRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP P G P G PGP G G GPP PP
Sbjct: 229 PGPPGPPGAPGNDGPPGP----PGPKGAPGPDGPPGVDGQSGPP 268
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 PXPP-PRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP P G P G PGP G G GPP PP
Sbjct: 224 PGPPGPPGAPGNDGPPGP----PGPKGAPGPDGPPGADGQSGPP 263
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PPP P G G P P G G P PP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 193 PXPPPRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PPP P G G P P G G P PP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 320 GGXPXXXXXGGPPPPXXPXGPGXXXPX-PLGGXXXXXPLGGG 198
G P G P P G G P P+GG P+GGG
Sbjct: 81 GVAPAPIGGGYAQAPQAPIGGGYAAPQAPIGGGYGGAPIGGG 122
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 796 PPXGGPPXXPPPIPXXPPXGQXP 864
PP PP PPP P PP P
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAP 155
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 193 PXPP-PRGXXXXXPPKGXGXXXPGPXGXXGGGGPPKXXXXGXPP 321
P PP P G P G PGP G G GPP PP
Sbjct: 224 PGPPGPPGAPGNDGPPGP----PGPKGAPGPDGPPGADGQSGPP 263
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 237 GXGGGXXRAXGXXGGXGPPXXXXGGXXPXKXKXXXGXXPPKK 362
G GGG R G GG GP G P K PP+K
Sbjct: 622 GGGGGPPRGPGGGGGGGP----TGPPAPPKPPAKPRGRPPRK 659
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 237 GXGGGXXRAXGXXGGXGPPXXXXGGXXPXKXKXXXGXXPPKK 362
G GGG R G GG GP G P K PP+K
Sbjct: 622 GGGGGPPRGPGGGGGGGP----TGPPAPPKPPAKPRGRPPRK 659
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 8/40 (20%)
Frame = +1
Query: 199 PPPRGXXXXXPPK--------GXGXXXPGPXGXXGGGGPP 294
PPPRG PP G G P GGGGPP
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.153 0.566
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,298,664
Number of Sequences: 27780
Number of extensions: 195842
Number of successful extensions: 2057
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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