Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C21
         (968 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    36   0.11 
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    36   0.11 

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = +2

Query: 611 PPPGEXXXXXFGPXSXSPXKKPXAPXFGXGXVXPPXG-GXXSPXSGNPKXXXPXPXAQXK 787
           PPP       +GP    P  KP  P  G G   PP G G   P    P+   P P     
Sbjct: 212 PPPRPQPTPGYGPPPPPPPPKP-QPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQPPRP 270

Query: 788 XPXCFSXPP 814
            P     PP
Sbjct: 271 QPGSEYLPP 279



 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/84 (27%), Positives = 26/84 (30%)
 Frame = +2

Query: 611 PPPGEXXXXXFGPXSXSPXKKPXAPXFGXGXVXPPXGGXXSPXSGNPKXXXPXPXAQXKX 790
           PPPGE       P   +P      P +G     PP G    P    P    P P  Q + 
Sbjct: 278 PPPGENEVTPTQPQPTAP-----VPEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRP 332

Query: 791 PXCFSXPPXXXXHXGXXXNXPXPP 862
           P     PP            P PP
Sbjct: 333 P----APPAPAPGPTYQPRPPSPP 352


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 35.5 bits (78), Expect = 0.11
 Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = +2

Query: 611 PPPGEXXXXXFGPXSXSPXKKPXAPXFGXGXVXPPXG-GXXSPXSGNPKXXXPXPXAQXK 787
           PPP       +GP    P  KP  P  G G   PP G G   P    P+   P P     
Sbjct: 212 PPPRPQPTPGYGPPPPPPPPKP-QPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQPPRP 270

Query: 788 XPXCFSXPP 814
            P     PP
Sbjct: 271 QPGSEYLPP 279



 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/84 (27%), Positives = 26/84 (30%)
 Frame = +2

Query: 611 PPPGEXXXXXFGPXSXSPXKKPXAPXFGXGXVXPPXGGXXSPXSGNPKXXXPXPXAQXKX 790
           PPPGE       P   +P      P +G     PP G    P    P    P P  Q + 
Sbjct: 278 PPPGENEVTPTQPQPTAP-----VPEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRP 332

Query: 791 PXCFSXPPXXXXHXGXXXNXPXPP 862
           P     PP            P PP
Sbjct: 333 P----APPAPAPGPTYQPRPPSPP 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,691,331
Number of Sequences: 53049
Number of extensions: 449618
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4853571111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)