Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C15
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0149 - 8935172-8935254,8935792-8937319                           31   1.2  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    29   5.0  
09_06_0325 + 22347286-22347574,22347770-22348054,22348508-223485...    29   6.6  
06_01_0036 + 364316-365758                                             29   6.6  
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171     29   6.6  
02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608           29   6.6  

>05_03_0149 - 8935172-8935254,8935792-8937319
          Length = 536

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 623 GSTRSTFLRCYSFWTCAQDGNSFRKDSSTPSSRATANYG 507
           G T+ST+  C+ F T A +  + R  S  P S     YG
Sbjct: 14  GCTKSTYTECHGFTTPAAEDRALRGTSPRPPSSFLLRYG 52


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 446 ATTHAKIRTGTPFIWRW*CIIRSWPWLSTRGWK 544
           +++H+++   T + WRW  I R + W   RG++
Sbjct: 55  SSSHSRVSDETLWQWRWRQITRPYSWRCRRGFR 87


>09_06_0325 +
           22347286-22347574,22347770-22348054,22348508-22348592,
           22348686-22348802,22349270-22349334,22349456-22349544,
           22349642-22349721,22349797-22349908,22349990-22350109,
           22350234-22350416
          Length = 474

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 749 HASVPF-GLPVXVXFXEKYRRDIDTGPIWELFQ 654
           + S+PF G P+     +KY+R +D    W LFQ
Sbjct: 354 NVSIPFAGPPLNTPSLQKYKRMVDAWGGWSLFQ 386


>06_01_0036 + 364316-365758
          Length = 480

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 478 PIHLEVVMH-HP*LAVALDEGVEESFLKLFPSCA 576
           P HL VV    P + V +D G E   L L  SCA
Sbjct: 344 PAHLRVVKELRPAVVVCVDHGCERGALNLLQSCA 377


>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
          Length = 1054

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 632 LLANYFTVETTPKWGLYQYHVDISP 706
           L AN+F V+  P   ++ Y+VDISP
Sbjct: 216 LSANHFLVQFDPGQKIFHYNVDISP 240


>02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608
          Length = 241

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 463 FCMRCCTSISPGCS 422
           FC+ CCTSI P C+
Sbjct: 34  FCLACCTSICPHCA 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,369
Number of Sequences: 37544
Number of extensions: 390475
Number of successful extensions: 1002
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)