Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C11
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    83   4e-18
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    29   0.055
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   2.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   2.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   2.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.3  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 82.6 bits (195), Expect = 4e-18
 Identities = 50/153 (32%), Positives = 75/153 (49%)
 Frame = +1

Query: 304 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 483
           +G +G A ++  S +GAA G   +G  I    V  P +  K++I V+    +AIYGL+ A
Sbjct: 13  FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 72

Query: 484 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXX 663
           ++++G LE   EP      K      G+V  GAGLAVG   L                  
Sbjct: 73  VLIAGGLE---EP------KGYTLFKGFVHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 123

Query: 664 XXXXXFVKILIVEIFGSAIGLFGLIVGIYMTSK 762
                FV ++++ IF   +GL+GLIV IY+ +K
Sbjct: 124 QQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 156


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 0.055
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
 Frame = +3

Query: 174 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTSPXYVGYPRNRL 326
           F S+L F+LLV +A+ +++   V N         K ++I  G+FL + S  ++ + +  L
Sbjct: 84  FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNL 143

Query: 327 FRCPVRCRSSH 359
             C V   S +
Sbjct: 144 QCCGVHSLSDY 154


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 DGGIRDVRRWTRCWLG 602
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 DGGIRDVRRWTRCWLG 602
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 555 DGGIRDVRRWTRCWLG 602
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 661 HPLEQHQSPRYQQQFHRIDSPSQQRVQ 581
           HP  Q Q+   QQQ  +   P QQ+ Q
Sbjct: 821 HPQAQAQAQPQQQQQQQQQQPQQQQQQ 847



 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 649  QHQSPRYQQQFHRIDSPSQQRVQ 581
            Q Q P+ QQQ  +   P QQ  Q
Sbjct: 1501 QQQQPQQQQQQQQQQQPQQQSQQ 1523



 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 658  PLEQHQSPRYQQQFHRIDSPSQQR 587
            P +Q   P+ QQQ  +   P QQ+
Sbjct: 1524 PQQQQPQPQQQQQQQQQQQPQQQQ 1547


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 39  ILDHKTSPF*VFLSRQKSGEKRPSL 113
           ILD+ TSP   FL ++ S  +R  L
Sbjct: 26  ILDNYTSPIVEFLQQEDSSIRRDPL 50


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 360 HGCSDNGQGNGKGDS 316
           +G +DNG GNG  ++
Sbjct: 252 NGANDNGNGNGASNN 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,101
Number of Sequences: 438
Number of extensions: 5337
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)