Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C10
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0551 + 4361640-4363386,4363443-4363687                           31   1.6  
03_02_0178 + 6195402-6199158,6199438-6200003                           29   3.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
06_03_1373 + 29667871-29668782,29668872-29669851,29670156-296703...    28   8.5  

>11_01_0551 + 4361640-4363386,4363443-4363687
          Length = 663

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +2

Query: 524 WRFSIGSAPLTSITKID--AQVRGGETRQDYKDTRRF-PLEAPSCALLVPTPAAYRIPVR 694
           WR    SA    I  +D  A ++  +T   Y+   R  P   P+C  LVP+P  YR P+R
Sbjct: 341 WRLCNTSAGADYIPCLDNEAAIKKLKTTAHYEHRERHCPASPPTC--LVPSPEGYRDPIR 398


>03_02_0178 + 6195402-6199158,6199438-6200003
          Length = 1440

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 571 RRSSQRWRNPTGL*RYQAFPPGSSLVRSPGSDPCRLP 681
           RR S  WR+  GL  Y+A P  S    SP + P RLP
Sbjct: 113 RRQSGGWRDSEGLDGYRAAPRRSG--ASPPTPPLRLP 147


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1373 +
           29667871-29668782,29668872-29669851,29670156-29670350,
           29670460-29670676
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 599 RQDYKDTRRFPLEAPSCALLVPTPAAYRIPV 691
           R ++++ R  P E P+C  LVP PA YR P+
Sbjct: 269 RYEHRE-RHCPDEGPTC--LVPLPAGYRRPI 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,273,586
Number of Sequences: 37544
Number of extensions: 474513
Number of successful extensions: 1514
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)