Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_C09
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation ... 253 5e-67
BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation ... 253 5e-67
AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation ... 253 5e-67
AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein. 253 5e-67
AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein. 253 5e-67
AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein. 253 5e-67
BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein. 125 2e-28
AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early embryogen... 35 0.45
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 32 3.2
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 32 3.2
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 32 3.2
BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein. 32 3.2
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 32 3.2
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 32 3.2
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 31 7.3
>BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation
initiation factor 3 subunit k protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein.
Length = 218
Score = 253 bits (620), Expect = 5e-67
Identities = 120/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Frame = +3
Query: 165 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 344
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 345 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 524
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 525 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 701
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 702 DGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 183 ESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 216
>BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein.
Length = 117
Score = 125 bits (301), Expect = 2e-28
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
Frame = +3
Query: 462 IKYLADILEQCDFAQFWNRVHQMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANL 641
I YL D+LE C F FW + + +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +
Sbjct: 1 ILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEM 60
Query: 642 LGGIDDVTLKHWVKKYGW-RDDGSLIFIANXDENIKTKNITEKIEFDHLAPIDGS 803
LG + D LK W+ KYGW D+ IFI + +E+IK KNI EKI+FD ++ I S
Sbjct: 61 LGDLSDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMAS 115
>AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early
embryogenesis protein protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.45
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 297 NLAVLKLYQFNPEKFNADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLA 476
NL L + P + +++TC +L KAL NFPH CLL S+ + + + +
Sbjct: 66 NLTRQGLAKGMPVRLLSEVTC-LLFKALKNFPHYQQLQKNCLL--SLTNSRILVDVPF-- 120
Query: 477 DILEQCDFAQFWNRVHQMPEL 539
D + F W H+ P++
Sbjct: 121 DRFDAAKFVMRWLCKHENPKM 141
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 974 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1015
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 868 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 909
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 203 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 244
>BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein.
Length = 853
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 300 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 341
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 31.9 bits (69), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 397 PILHCASAYFLNP-W--WKMRQFLKSNT*PTFWSNVTLLSFG 513
P+LH A+ FL+ W W+ L T P FW N+T FG
Sbjct: 522 PLLHRAAIAFLHALWQDWRDSAMLVLRTKPKFWENLTSPLFG 563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,707,574
Number of Sequences: 237096
Number of extensions: 2280861
Number of successful extensions: 7795
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7788
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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