Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C08
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 425 NLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPL-LNYGVKCMSMG 601
           NLA A+   +P K++ +LD D+ GPS P MM +  E + N      P+ +   +  MS+ 
Sbjct: 78  NLARAL-ASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIA 136

Query: 602 LLVSGEN-XVMCRG 640
            L+  +N  V+ RG
Sbjct: 137 FLLGDKNDAVIWRG 150


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 443 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 562
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 443 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 562
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 364 KEYHTCSFRERRCWKNYHSCKPSMCYESN 450
           K ++ CS RE+ C K+   C P  C + N
Sbjct: 136 KCFYKCSEREKYCAKSCGFCTPGTCKDCN 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,251,046
Number of Sequences: 27780
Number of extensions: 327124
Number of successful extensions: 522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)