Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C06
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 486 ETNKRIEQYKKENKEL 533
           E   RIEQYK+EN  +
Sbjct: 116 EVENRIEQYKRENPSI 131


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 776 LFXLFFICYSLSKRIENIFGIALCKH*FINESFLLANLL 660
           LF +++I YS+ +     FG  L K      + +  NLL
Sbjct: 153 LFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLL 191


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 426 DYLEEIETIVYNLTN 470
           D+L+ ++TI+Y  TN
Sbjct: 232 DFLDNVDTIMYEKTN 246


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +3

Query: 159 RCKTTK-YRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSC 275
           RC  +  Y     +  +N C    C+N    L L GS SC
Sbjct: 169 RCHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSC 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,104
Number of Sequences: 336
Number of extensions: 3564
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)