Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_C06
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subuni... 159 6e-40
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 39 0.001
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 37 0.004
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 32 0.13
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 31 0.22
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo... 31 0.22
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 30 0.38
SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces pombe... 30 0.38
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 30 0.51
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 29 0.89
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 28 1.6
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 28 1.6
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 28 2.1
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 28 2.1
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 2.1
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 27 2.7
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 27 3.6
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 27 3.6
SPAC343.18 |rfp2||ubiquitin-protein ligase E3 Rfp2|Schizosacchar... 27 3.6
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 27 3.6
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 4.7
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 6.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.3
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 26 6.3
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 26 8.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 8.3
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 26 8.3
>SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subunit
Pmh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 318
Score = 159 bits (385), Expect = 6e-40
Identities = 66/145 (45%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
Frame = +3
Query: 144 DQACPRCKTTKYRNPSLKLMVNV-CGHVLCENCVDLLFLKGSGSCPD--CNIVLRRGNFR 314
D+ CP C+ +Y NP++KL++N C H +CE+CVD +F G CP CN +LR+ FR
Sbjct: 10 DEKCPLCQADRYLNPNMKLLINPECYHKMCESCVDRIFTTGPAQCPTPGCNKILRKAKFR 69
Query: 315 VQLFEDPMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVETN 494
Q FED +E+EVD+RKR+ R +NK +++F+SL+ YNDYLEE+E + +NL ID+ ET
Sbjct: 70 EQTFEDAQIEREVDVRKRISRIFNKGQQEFDSLQAYNDYLEEVEILTFNLIYKIDVEETE 129
Query: 495 KRIEQYKKENKELIMKNKAKLGRKA 569
++++QY+K+N++ I N A+ +A
Sbjct: 130 EKVKQYEKQNRDSIAANSARAAAEA 154
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 38.7 bits (86), Expect = 0.001
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 159 RCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
+C + N KL+ N CGH C NC++ + + +CP C
Sbjct: 638 KCSVCNFSNWKSKLIPN-CGHAFCSNCMEPFYEHKTSTCPQC 678
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 204 VNVCGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQLFEDPMVEKEVDIRKRVLRDY 383
+ CGH+ C C++ +LK S SCP C L + N + E +++ R+ + +
Sbjct: 1104 ITTCGHLYCSFCLEA-WLKHSSSCPMCKTKLNKNN-AYYIGE----SRDIYSRQEFVTGF 1157
Query: 384 NKKEE 398
NK++E
Sbjct: 1158 NKRDE 1162
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 132 SIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
S+ +C C T Y N + + C H + C+D G+ SCP C
Sbjct: 759 SLSSADSCLICLET-YTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLC 808
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 WNKLQKI-HSIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
W+ + + + + D CP C N + CGH+ +NC+ +L+ +CP C
Sbjct: 91 WDSFEPLSNDQLMDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQ-KWLENHCTCPLC 149
>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Frame = +3
Query: 153 CPRCK----TTKYRNPSLKLMVNVCGHVLCENCVDLL--FLKGSGSC--PDCNIVLRRGN 308
CPRC+ T+K + S L CGHV C +C +L + C DC L N
Sbjct: 189 CPRCQEPLGTSKSKEKSA-LWATKCGHVYCGSCAKVLKTSKRSQSKCLVNDCGRYLNTKN 247
Query: 309 FRVQLF 326
+LF
Sbjct: 248 AMWELF 253
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQLFEDPMVEKEVD-IRKRVLRDYNK 389
C + CE C+ L CP+C+ R+ L D ++E++ + K VL +K
Sbjct: 298 CDKLFCEECIQTALLDSDFECPNCH---RKDVLLDTLNPDYQKQREIEAVVKSVLGSNSK 354
Query: 390 KEEDFNSLREYNDYLEE 440
+ + + N + E
Sbjct: 355 NSDKVGTSDDNNTPMSE 371
>SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 675
Score = 30.3 bits (65), Expect = 0.38
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 384 NKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKKENKEL 533
N KE D N+L+ +D EE+E++VY + ++E N + + + +EL
Sbjct: 50 NNKEFDENTLK--SDKFEEVESLVYEFSTPSTLIEPNYLLTAWHELWEEL 97
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 363 KRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKK 518
K + R + DF + +++ ++ T + L N+D E+ + QYKK
Sbjct: 178 KELTRVFRHPPPDFAGKVSFKEHITQLNTCIMFLEENLDFQESPHYLGQYKK 229
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 29.1 bits (62), Expect = 0.89
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 225 LCENCVDLLFLKGSGSCPD-CNIVLRRGNFRVQLFEDPMVEKEVDIRKRVLRDYNKKEED 401
L + + L F+ + P N+ + R F + DP+V + +D KR L+D N + +
Sbjct: 319 LSKTDISLPFITADATGPKHINMEISRAQF--EKLVDPLVRRTIDPCKRALKDANLQTSE 376
Query: 402 FNSL 413
N +
Sbjct: 377 INEV 380
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 1.6
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Frame = +3
Query: 81 NITVITIYLWNKLQKIH-SIM---DD---QACPRCKTTKYRNPSLKLMVNVCGHVLCENC 239
N++++ L NK +++ SI+ DD Q CP C + + + +CG V+C C
Sbjct: 250 NVSMLDALLLNKAKRLEQSIVHWQDDSVVQICPECNNS-FTLTRRRRHCRLCGRVICRFC 308
Query: 240 VDLLFLKGSGS----CPDCNIVLRRGNFRVQLFEDPMVEKEVDIRKRVLRDYNKKEEDFN 407
V + L C CN + FR L++ K + + + ++ N
Sbjct: 309 VLEISLPQHPQPLLICMSCN----QNYFRNVLYQTER-SKSLGYIRHIEHLQVFRQAMVN 363
Query: 408 SLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKKENKELIMK 542
R Y D L E+ L+ I T K ++ +K+ EL +K
Sbjct: 364 YYRLYEDSLSEL------LSGEIITEATLKIVKDRRKKFLELCVK 402
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 384 NKKEEDFNSLREYNDYLEEIETIVYNLTN--NIDIVETN 494
N K ++ + L E +EE IVYN TN N+D++ +
Sbjct: 346 NAKADEIDRLLEVVKQIEEAGAIVYNNTNFYNLDVISND 384
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 141 DDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
D + C C +Y S C H+ C+D LK S CP C
Sbjct: 494 DQRECTIC-LCEYSEESPLYRELPCHHIFHPACIDPYLLKNSDLCPLC 540
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 360 RKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVET 491
+K++ RDY+K++ FN L + Y+ + IV T N ++ T
Sbjct: 961 KKKIGRDYSKEKLTFNDLSSRSQYI-IMNEIVLKHTKNTSVLFT 1003
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 704 CRGQCQRYSQYVCSDCS 754
C G C SQYVCSD S
Sbjct: 910 CNGACYNPSQYVCSDGS 926
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +3
Query: 93 ITIYLWNKLQKIHSIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGS 272
I L +KL I + D C C Y+ L C HV C +C+ +L +
Sbjct: 340 ICFSLSSKLFSIIPQLRDFECAICSNVAYKPVRLG-----CSHVFCLHCLIILQKQKVDF 394
Query: 273 CPDC 284
CP C
Sbjct: 395 CPLC 398
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 198 LMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
L V C HV C+D SCP CN
Sbjct: 218 LRVLPCEHVFHTQCIDTWMTTMKASCPLCN 247
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +3
Query: 393 EEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKKENKE----LIMKNKAKLG 560
+E F SL + IVY++TN+ V T K IE + E + +++ NK L
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLA 129
Query: 561 RK 566
K
Sbjct: 130 DK 131
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 339 VEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETI----VYNLTNNIDIVETNKRIE 506
V+KE+ ++ + D ++ E+ NSL E L E ET + N+ ++I + +
Sbjct: 59 VQKEIGLKMKAKEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSSIGNIVHDSVPV 118
Query: 507 QYKKENKELIMK 542
++N E+I K
Sbjct: 119 SMDEDNNEIIRK 130
>SPAC343.18 |rfp2||ubiquitin-protein ligase E3
Rfp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +3
Query: 150 ACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCP 278
AC +C + + CGH+ C C L K + CP
Sbjct: 146 ACAKCGNELVSDEKKSIFAAKCGHLFCSTCAKEL-RKKTVPCP 187
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 426 DYLEEIETIVYNLTNNIDIVETNKRIEQYKKENKELIMKN 545
DYLE++E V + IDI E + + ++E + +M++
Sbjct: 83 DYLEDLERHVDDCNKRIDIAEARREKTKEEEERIDELMRD 122
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 342 EKEVDIRKRVLRDYNKKEEDFNSLREY--NDYLEEIETIVYNLTNNIDIVETNKRIEQYK 515
+KEV+ + L + + + E S E N+ + EIE TN I + QY
Sbjct: 513 KKEVEALQLQLVNSSTELESVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQYY 572
Query: 516 KENKELIMKNKAKLGR 563
+E+KE I KL R
Sbjct: 573 RESKEYIASLYEKLDR 588
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/47 (25%), Positives = 17/47 (36%)
Frame = +3
Query: 144 DQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
D+ C C + N + + C H C+D SCP C
Sbjct: 522 DERCLVCLSNFELNDECRRLKQ-CNHFFHRECIDQWLTSSQNSCPLC 567
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 6.3
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +3
Query: 294 LRRGNFRVQLFEDPMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEE----IETIVYN 461
+R + LF++ VEK D ++ YN K +F+ L++ LEE + +
Sbjct: 587 IRENEESISLFKEE-VEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTS 645
Query: 462 LTNNI--DIVETNKRIEQYKKENKE 530
T+N+ + T ++ +KEN+E
Sbjct: 646 KTSNLLEQLKMTEAEVDSLRKENEE 670
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
C CK YR+P + CGH CE C + K + +C C
Sbjct: 254 CLICKKD-YRSP----IATTCGHHFCEQCAITRYRK-TPTCIQC 291
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 201 MVNVCGHVLCENCVDLLFLKGSGSCPDC 284
++++CGH C C+ CP C
Sbjct: 639 IISLCGHGFCYQCIQKRIETRQRRCPIC 666
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 327 EDPMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEE---IETIVYNLTNNIDIVETNK 497
++PM + E + + D + +++DF+ L E ++ + E E + N + D V++++
Sbjct: 4125 DEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDGVKSDE 4184
Query: 498 RIEQYKKENKELIMKNKAKLGRKA 569
+EQ + + I N K+ K+
Sbjct: 4185 ELEQGEVPEDQAI-DNHPKMDAKS 4207
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 393 EEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKK-ENKELI-MKNKAK 554
EEDF + +Y + + +I + Y L + + + KRI + EN EL ++ K K
Sbjct: 285 EEDFYNASKYLNAISDIPFLNYELITSTKLAKVLKRIAFLEHLENDELYDIRQKCK 340
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,959,283
Number of Sequences: 5004
Number of extensions: 58008
Number of successful extensions: 242
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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