Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_C06
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage ... 154 7e-38
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 37 0.022
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 36 0.039
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 36 0.039
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 35 0.068
AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical ... 35 0.068
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 35 0.090
Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical pr... 33 0.21
AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear recep... 33 0.21
AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear recep... 33 0.21
AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear recep... 33 0.21
AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear recep... 33 0.21
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 33 0.27
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 33 0.36
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 33 0.36
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 32 0.63
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 32 0.63
Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.84
U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical pr... 31 0.84
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 31 0.84
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 31 0.84
AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical ... 31 0.84
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 31 1.1
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 31 1.1
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 31 1.5
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 30 2.6
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 29 3.4
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.4
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 29 4.5
AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.5
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 5.9
AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p4... 29 5.9
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 29 5.9
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage a
trois) tfiih subunitprotein 1 protein.
Length = 310
Score = 154 bits (374), Expect = 7e-38
Identities = 63/135 (46%), Positives = 97/135 (71%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQLFED 332
C +CK+ +Y N L +M+N CGH LC+NCVD +F SG+C CN VLR+ NFR Q++ED
Sbjct: 4 CKKCKSNEYTNKQLVMMINECGHPLCKNCVDNIFALNSGNCHVCNRVLRKNNFREQIYED 63
Query: 333 PMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQY 512
P+++KE +R+++ + YN K++DF +LRE+ DY E ET+VYNL ++ ETN I+ +
Sbjct: 64 PLIDKETFLRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVFETNVNETNAEIQAF 123
Query: 513 KKENKELIMKNKAKL 557
++++KE I +NK +L
Sbjct: 124 EEKHKEQIDRNKRRL 138
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 198 LMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQLFEDPMVEK 347
+M CGH C+ C+ + F++ +CP C L G+ R +L +DP ++
Sbjct: 173 IMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNL--GSKR-ELQQDPRFDQ 219
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
CP CKT P +M+ C H+ CE C+ ++ CP CN
Sbjct: 782 CPSCKT----RPKDCIMLK-CYHLFCETCIKTMYDTRQRKCPKCN 821
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
CP CKT P +M+ C H+ CE C+ ++ CP CN
Sbjct: 785 CPSCKT----RPKDCIMLK-CYHLFCETCIKTMYDTRQRKCPKCN 824
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 35.1 bits (77), Expect = 0.068
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 120 QKIHSIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLR 299
Q I+S +D + C C Y L + CGH C C+ + + +G CP C
Sbjct: 14 QAINSTIDKE-CAVC----YSEMILPTTIPSCGHKFCFICLKGVSVSNNGDCPIC----- 63
Query: 300 RGNFRVQLFEDPM--VEKEVDI 359
RG Q+F+ P+ V+ ++DI
Sbjct: 64 RGPIDSQIFKKPLQAVDLKMDI 85
>AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical
protein Y4C6A.3 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKL--MVNVCGHVLCENCV-DLLFLKGSGSCPDCNIV 293
C C T +N S + +++ CGH LCE C+ ++L SCP C V
Sbjct: 255 CAICSTKYSKNCSTQTPRILDKCGHTLCEGCIQNILKHSNQISCPICKSV 304
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 34.7 bits (76), Expect = 0.090
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 195 KLMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQLFEDPMVEKEVDIRKRVL 374
K+ VCGH+ C+ ++ CP C + + F +LF D + + K
Sbjct: 25 KISAIVCGHIYHHGCIS-QWIATKRQCPSCRRTVPKNGFVEKLFFD-VQRMGGEAEKPPE 82
Query: 375 RDYNKKEEDFN-SLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQYKKENKELIMKNKA 551
DY ++ + SL+ + L + T NL + + +E K+I + K + ++ I K +A
Sbjct: 83 IDYREEHYKLSTSLKVEQEKLGTLNTENKNLKDTVKSLE--KKIIREKDKYRQEIPKLQA 140
Query: 552 KLGRKAI 572
+ I
Sbjct: 141 TINHLTI 147
>Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical
protein F53F8.3 protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIVLRRG 305
CGH +C CV + +G CP C IV + G
Sbjct: 163 CGHTMCMGCVQKIVGQGYIKCPFCRIVTKIG 193
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 132 SIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
SI++ C C +Y K + CGH +CE+C + S CP CN
Sbjct: 2 SIVNTTECIICYN-EYDTELRKPCIGTCGHSICESCKHQMV---SSKCPQCN 49
>Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical
protein C11G6.4b protein.
Length = 379
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 134 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 174
>Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical
protein C11G6.4a protein.
Length = 437
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 192 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 232
>AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 192 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 232
>AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 192 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 232
>AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 138 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 178
>AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 165 KTTKYRNPSLKLMVNVCGHVLC-ENCVDLLFLKGSGSCPDCN 287
K YRN L M+ CG++ C N D+LFL SG DCN
Sbjct: 188 KKLLYRNFFLPFMILECGYMCCLNNRTDILFLP-SGDYIDCN 228
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
C +C+ Y + K+ CGH +CE+C D K S C CN
Sbjct: 9 CSKCEKI-YDDNKRKICSGKCGHSICESCFD---RKSSDICSICN 49
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNV-CGHVLCENCVDLLFLKGSGSCPDC 284
C C+ + YR+ S ++ N+ CGHV+C C LF CP C
Sbjct: 6 CEICEES-YRSES-RIPKNLNCGHVICPVCASKLFENPEVKCPTC 48
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIVL------------RRGNFRVQLFEDPMVEKEVD 356
C H C++C+ F + +CP C + R N V F M E+D
Sbjct: 318 CMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTHYVTYDRAVNELVNQFVPKMENNELD 377
Query: 357 IRKRVLRD 380
+RK LRD
Sbjct: 378 VRKTFLRD 385
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 333 PMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVETNKRIEQY 512
P+ + E KR+ R K S + DY+E++E V T ++ ++IE+
Sbjct: 276 PLTKAEERDLKRIRRKIRNKRSAQTSRKRKQDYIEQLEDRVSESTKENQALK--QQIERL 333
Query: 513 KKENKELI---MKNKAKLGRKA 569
EN+ +I K +A+LG+ A
Sbjct: 334 SSENQSVISQLKKLQAQLGQNA 355
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 120 QKIHSIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLF-LKGSGSCPDCNIVL 296
+ + + + C C +T Y++P L + C H+ C +C++ F K CP C VL
Sbjct: 10 ETVARLQKELKCGICCST-YKDPIL----STCFHIFCRSCINACFERKRKVQCPICRSVL 64
Query: 297 RRGNFR 314
+ + R
Sbjct: 65 DKRSCR 70
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 204 VNVCGHVLCENCVDLLFLKGSGSCPDC 284
V VCGH LC +C++ L + CP C
Sbjct: 216 VLVCGHTLCTSCIEKLDVGDGIRCPFC 242
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 31.9 bits (69), Expect = 0.63
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNFRVQL--- 323
CP C N S ++ + CGH+ C C+ + + C+ + R F + L
Sbjct: 105 CPICLA----NASFPVLTD-CGHIFCCECIIQYWQQSKAIVTPCDCAMCRSTFYMLLPVH 159
Query: 324 FEDPMVEKEVD--IRKRVLR--DYNKKEEDFNSLREYNDYLEEIETIVYNLTNN 473
+ +E D I++ +R DYN++ F+ R DY+ +I ++ L N
Sbjct: 160 WPTMGTSEETDDHIQENNIRIDDYNRR---FSINRPVLDYIRDIPILIPYLIRN 210
>Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical
protein D1081.9 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.84
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Frame = +3
Query: 159 RCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCNIVLR----RGNFR---V 317
+C + KL + CGHV C+NC F + C C L+ N R +
Sbjct: 5 QCNHCGIKPNQTKLYLTACGHVFCQNCTKAAF---NSQCYLCKKPLKVDEINKNLRPDLM 61
Query: 318 QLFEDP 335
+LF+DP
Sbjct: 62 ELFKDP 67
>U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical
protein T20F7.1 protein.
Length = 773
Score = 31.5 bits (68), Expect = 0.84
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +3
Query: 243 DLLFLKGSGSCPDCNIVLRR-GNFRVQLFEDPMVEKEVDIRKR--VLRDYNKKEEDFNSL 413
D + KG + P +V + R + + P+VEK+ D+ R ++Y ++ E +++
Sbjct: 557 DFISSKGIKNRPVYPVVKAKLARCRFPVVDKPLVEKQFDVEARTAAYQEYREECEQEHAV 616
Query: 414 REYNDYLEEIETIVYNLTNNIDIV-ETNKRIEQYKKENK 527
Y + +EE T I++ E+ K +E +K+ +
Sbjct: 617 NTYEEVVEEDGLFHVPATPGIEVYDESEKALEVTEKKEE 655
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 363 KRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVET--NKRIEQYKKENKELI 536
+R++ D K ED +++ + E+E+ YNL N I+ E K E KK +E +
Sbjct: 544 ERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAV 603
Query: 537 MKNKAKLGRKA 569
+ + LG A
Sbjct: 604 EEAISWLGSNA 614
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.84
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDC 284
C H LCE C+ L G CP C
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFC 51
>AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical
protein Y38C1AA.6 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 132 SIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDCN 287
S+ C +C + + + C H +CE C D K S SCP CN
Sbjct: 2 SLCGSVLCIKCSLV-FDEKTRRPCTGTCNHSICEQCFD---QKHSPSCPICN 49
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 369 VLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNI--DIVETNKRI 503
VL D ++F S E+N +L ++ TI+ + NI +ETNK I
Sbjct: 105 VLEDLETNYKEFRSSPEHNQFLSDVLTIISSSGQNIFPTSLETNKTI 151
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 144 DQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
D CP C+ K P+ + CGH C C+ +++ G CP C
Sbjct: 9 DAECPICQC-KMIVPTT---IPACGHKFCFICLKGVYMNDMGGCPMC 51
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIV 293
CGH LC C+ + + CP C V
Sbjct: 27 CGHALCHKCITAMVNNSTVECPFCRTV 53
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/65 (26%), Positives = 36/65 (55%)
Frame = +3
Query: 309 FRVQLFEDPMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVE 488
F+++L + V +V + +DY + D +S +D L+EI+T++YN +++
Sbjct: 104 FKIKLLDVSKVWTDVKVN---YQDYLRNTLDEHSNSNKSDVLKEIDTLIYNKEKLNEVLI 160
Query: 489 TNKRI 503
T K++
Sbjct: 161 TAKKL 165
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
C C + Y N + V CGH +C CVD + + GS P C
Sbjct: 176 CTICYLS-YDNEARVPRVMKCGHTICHTCVDRIIEQSFGS-PKC 217
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGSCPDC 284
C C + Y N + V CGH +C CVD + + GS P C
Sbjct: 176 CTICYLS-YDNEARVPRVMKCGHTICHTCVDRIIEQSFGS-PKC 217
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 354 DIRKRVL-RDYNKKEEDFNSLREYNDYLEEIETIVYNL-TNNIDIVETNKRIEQYKKENK 527
D+ K +L +KK + SL +Y ++E + +Y + NN + E++ E K +NK
Sbjct: 426 DVAKLLLFESSSKKAGELTSLGDYVKRMQEGQKEIYYMYANNRQLAESSPYYEVIKSQNK 485
Query: 528 ELI 536
E++
Sbjct: 486 EVL 488
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 117 LQKIHSIMDDQACPRCKTTKYRNPSLKLMVNVCGHVLCENCVDLLFLKGSGS--CPDC 284
LQ++ ++ C C + + V CGH C +C+++ + G CP C
Sbjct: 53 LQQVVEWLEGPKCGICLAQYWSTGDMAPRVMNCGHTYCGSCIEIFAEQKDGMVICPFC 110
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Frame = +3
Query: 153 CPRCKTTKYRNPSLKLMVNVCGHVLCENCV-----DLLFLKGSG---SCPDCNIVLRR 302
CP C+ ++ + +++ CGH LCE C+ D GSG CP C V+ +
Sbjct: 10 CPVCQE-EFDDQKAPFIIS-CGHSLCETCIVHLKSDYSDAYGSGGQTQCPTCRAVVSK 65
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Frame = +3
Query: 201 MVNVCGHVLCENCVDLL--FLKGSGS------CPDCNIVLR 299
MV CGH +C+NC + + + +GS CP C +V R
Sbjct: 1357 MVFTCGHRICQNCFEKMRALQRRAGSAEDVVACPTCRVVNR 1397
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIVLRRGNF 311
CGH CE+C+ + + CP C + NF
Sbjct: 158 CGHTYCESCIQVCKHQFQIKCPFCTTTSYQINF 190
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 144 DQACPRCKTTKYRNPSLKLMV--NVCGHVLCENCVDLLFLKGSGSCPDC 284
D+ PR +K P LKL + CGH +C C + L CP C
Sbjct: 18 DENIPRI-LSKLLLPFLKLKNKNSGCGHTICHGCAEKLLQNSMILCPFC 65
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 369 VLRDYNKKEEDFNSLREYNDYLEEIETIVYNLTNNIDIVET--NKRIEQYKKENKELIMK 542
++ D K ED +++ + E+E+ YNL N I+ E K E KK +E + +
Sbjct: 546 MINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEE 605
Query: 543 NKAKLGRKA 569
+ LG A
Sbjct: 606 AISWLGSNA 614
>AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical
protein K09F6.7 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDCNIVL-RRGNFRVQLFEDPMVEKEVDIRKRVLRDYNK 389
C H LCE C+ + CP C GN L ++ + + + + + +
Sbjct: 27 CSHTLCEGCIKKMLGNSKIVCPFCREPTDMPGNKMESLHKNFALIQAIQLFAKTTKITEV 86
Query: 390 KEEDFNSLREYNDYLEE 440
+E + + DYL E
Sbjct: 87 EEPMLEKCKHHPDYLVE 103
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Frame = +3
Query: 297 RRGNFRVQLFEDPMVEKEVDIR-----KRVLRD-----YNKKEEDFNSLREYNDYLE-EI 443
++ N +Q F D + + E++++ K L+ K E+ + E + LE E+
Sbjct: 428 QQANLEIQEFHDKIKQLELEVQLSSENKEKLQAELMVVQEKASENIKNAEEKVNGLEAEV 487
Query: 444 ETIVYNLTNNIDIVETNKRIEQYK 515
E + + TNN +VE +++E+++
Sbjct: 488 EKLRFEATNNSRVVELEQQLEEFR 511
>AF039050-3|AAC47936.2| 498|Caenorhabditis elegans Cytochrome p450
family protein 34A6 protein.
Length = 498
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 294 LRRGNFRVQLFEDPMVEKEVDIRKRVLRDYNKKEEDFNSLREYNDYLEEIETIVYNLT-- 467
L F + F + + + + I +++ +YN + EDF+ N ++ ++ ++L
Sbjct: 122 LEHRRFALTTFRNFGIGRNI-IEGKIMEEYNYRFEDFHETHFKNGAIQVSASMFFDLLVG 180
Query: 468 NNIDIVETNKRIEQYKKENKELIMKNKAKLGRKAI 572
+ I+ + ++R EQ KE +EL K L +I
Sbjct: 181 SIINQLLVSERFEQDDKEFEELKTKLTMALENSSI 215
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCPDC 284
CGH +C+ C L + SCP C
Sbjct: 28 CGHSVCQCCATKLLKNSAISCPFC 51
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 213 CGHVLCENCVDLLFLKGSGSCP 278
CGH LC +C++ L G CP
Sbjct: 175 CGHNLCRSCINKLTGNGIVKCP 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,839
Number of Sequences: 27780
Number of extensions: 326090
Number of successful extensions: 1170
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -