Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_C04
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    29   0.063
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 28.7 bits (61), Expect = 0.063
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 367 PLDESEPSSSIFFSVTIVTLFSPQSLF*DL 278
           P+D+ EPS  +F+  +  TL++P   F DL
Sbjct: 95  PIDDYEPSFDLFYYPSRQTLYTPVQYFKDL 124


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 447 AQCTCPNCDE 476
           A C CPNC E
Sbjct: 289 ATCDCPNCQE 298


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 347 VVFNFLFCYY 318
           +VF+F +CYY
Sbjct: 268 IVFSFCYCYY 277


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 392 FVFNFDILSTGRI*AVVFNFLF-CYYRDAVLATIIVLRSLLRH 267
           F+  F I    R   + +NF   CY+   VL  ++++  +L+H
Sbjct: 32  FICLFPITINIRKNGLNYNFTKKCYFLRMVLIDLLIVGCILKH 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,570
Number of Sequences: 336
Number of extensions: 3782
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)